LICENSE
MANIFEST.in
README.md
environment.yml
pyproject.toml
configs/train.yaml
configs/data/protein_seg.yaml
configs/model/da_module.yaml
configs/trainer/default.yaml
constraints/py310-ci.txt
examples/6fhu.pdb
examples/README.md
reproduction/legacy/README.md
reproduction/legacy/analyze_geometric.py
reproduction/legacy/eval_dataset.py
reproduction/legacy/eval_run.py
reproduction/legacy/eval_utils.py
reproduction/legacy/get_af2.py
reproduction/legacy/map_labels-o.py
reproduction/legacy/map_labels.py
reproduction/legacy/pdb_uniprot_mapping.json
reproduction/legacy/preprocess_esm.py
reproduction/legacy/run_Predict_ProtCross.py
reproduction/legacy/run_Strategy.py
reproduction/legacy/run_multiseed_benchmark.py
reproduction/legacy/sensitivity-cutoff.py
reproduction/legacy/setup_assets.py
reproduction/legacy/test_adaptive.py
reproduction/legacy/train.py
src/evopoint_da/__init__.py
src/evopoint_da/_compat.py
src/evopoint_da/assets.py
src/evopoint_da/cli/__init__.py
src/evopoint_da/data/__init__.py
src/evopoint_da/evaluation/__init__.py
src/evopoint_da/experiments/__init__.py
src/evopoint_da/inference/__init__.py
src/evopoint_da/models/__init__.py
src/evopoint_da/models/backbones/__init__.py
src/evopoint_da/models/heads/__init__.py
src/evopoint_da/training/__init__.py
src/protcross/__init__.py
src/protcross/assets.py
src/protcross/cli/__init__.py
src/protcross/cli/download_af2.py
src/protcross/cli/main.py
src/protcross/cli/map_labels.py
src/protcross/cli/predict.py
src/protcross/cli/preprocess.py
src/protcross/cli/setup_assets.py
src/protcross/cli/train.py
src/protcross/configs/__init__.py
src/protcross/configs/train.yaml
src/protcross/configs/data/protein_seg.yaml
src/protcross/configs/model/da_module.yaml
src/protcross/configs/trainer/default.yaml
src/protcross/data/__init__.py
src/protcross/data/af2.py
src/protcross/data/components.py
src/protcross/data/datamodule.py
src/protcross/data/dataset.py
src/protcross/data/esm.py
src/protcross/data/label_mapping.py
src/protcross/data/pca.py
src/protcross/data/preprocess.py
src/protcross/data/structure.py
src/protcross/evaluation/__init__.py
src/protcross/evaluation/adaptive.py
src/protcross/evaluation/metrics.py
src/protcross/experiments/__init__.py
src/protcross/experiments/multiseed_benchmark.py
src/protcross/experiments/strategy_search.py
src/protcross/inference/__init__.py
src/protcross/inference/pdb.py
src/protcross/inference/predictor.py
src/protcross/models/__init__.py
src/protcross/models/domain_weights.py
src/protcross/models/module.py
src/protcross/models/backbones/__init__.py
src/protcross/models/backbones/pointnet2.py
src/protcross/models/heads/__init__.py
src/protcross/models/heads/classifier.py
src/protcross/training/__init__.py
src/protcross/training/run.py
tests/conftest.py
tests/test_assets.py
tests/test_checkpoint_smoke.py
tests/test_cli.py
tests/test_docs_drift.py
tests/test_inference_result.py
tests/test_label_mapping.py
tests/test_legacy_archive.py
tests/test_metrics.py
tests/test_packaging_and_compat.py
tests/test_pca_and_dataset.py
tests/test_strategy_search.py
tests/test_structure_and_pdb.py