anndata==0.8.1
communities==3.0.0
community==1.0.0b1
datasets==3.0.1
fairseq==0.12.2
h5py==3.11.0
matplotlib==3.7.3
networkx==3.0
numba==0.56.4
numpy==1.22.0
pandas==2.0.3
peft==0.8.2
pyarrow==17.0.0
python_louvain==0.16
pytorch_lightning==1.9.4
scanpy==1.9.8
scikit_learn==1.3.2
scipy==1.10.1
seaborn==0.13.0
sim_fish==0.2.0
torch_geometric==2.5.3
torchmetrics==0.11.4
tqdm==4.66.5
umap==0.1.1
umap_learn==0.5.4

[torch_amd]
torch==2.3.1+rocm6.0
torchaudio==2.3.1+rocm6.0
torchvision==0.18.1+rocm6.0

[torch_nvidia]
torch==2.3.1+cu121
torchvision==0.18.1+cu121
torchaudio==2.3.1+cu121
