LICENSE
README.md
pyproject.toml
src/scatlaspy/__init__.py
src/scatlaspy.egg-info/PKG-INFO
src/scatlaspy.egg-info/SOURCES.txt
src/scatlaspy.egg-info/dependency_links.txt
src/scatlaspy.egg-info/requires.txt
src/scatlaspy.egg-info/top_level.txt
src/scatlaspy/data/__init__.py
src/scatlaspy/data/_atlas.py
src/scatlaspy/data/_expression_source.py
src/scatlaspy/data/_filter_index.py
src/scatlaspy/data/_minibatch.py
src/scatlaspy/io/__init__.py
src/scatlaspy/io/_input.py
src/scatlaspy/io/_output.py
src/scatlaspy/io/_progress.py
src/scatlaspy/plots/__init__.py
src/scatlaspy/plots/_cluster_size.py
src/scatlaspy/plots/_dotplot.py
src/scatlaspy/plots/_hvg.py
src/scatlaspy/plots/_pca.py
src/scatlaspy/plots/_qc.py
src/scatlaspy/plots/_rank_genes_groups.py
src/scatlaspy/plots/_umap.py
src/scatlaspy/plots/_utils.py
src/scatlaspy/plots/_violin.py
src/scatlaspy/preprocessing/__init__.py
src/scatlaspy/preprocessing/_quality_control.py
src/scatlaspy/preprocessing/_transformation.py
src/scatlaspy/tools/__init__.py
src/scatlaspy/tools/_annotation.py
src/scatlaspy/tools/_graph_clustering.py
src/scatlaspy/tools/_kmeans.py
src/scatlaspy/tools/_pca.py
src/scatlaspy/tools/_rank_genes_groups.py
src/scatlaspy/tools/_umap.py
tests/test_atlas_io_contracts.py
tests/test_h5ad_file_io.py
tests/test_preprocessing.py
tests/test_preprocessing_pca_contracts.py
tests/test_read_index_minibatch.py
tests/test_storage_io.py
tests/test_tools_workflow.py