numpy>=1.26.4
scipy>=1.11.4
pandas>=2.0.3
h5py>=3.11.0
matplotlib>=3.8.4
tqdm>=4.66.4
scikit-learn>=1.4.2
igraph>=0.11.0
louvain>=0.8.2
setuptools<81
umap-learn>=0.5.6
anndata>=0.11.4
pyarrow>=15.0.2
scanpy>=1.10.4
duckdb>=1.5.3

[docs]
sphinx<8.2,>=8.1.3
myst-parser<5.0,>=4.0.1
myst-nb>=1.4.0
sphinx-copybutton>=0.5.2
sphinx-design<0.7,>=0.6.1
sphinx-autodoc-typehints<3.1,>=3.0.1
sphinx-book-theme<1.2,>=1.1.4
numpydoc>=1.10.0
ipywidgets>=8.1.8

[parametric]
torch>=2.2.0

[test]
pytest>=8.4.1
pytest-cov>=7.1.0
hypothesis>=6.112.2
psutil>=6.1.1
