.gitignore
CHANGELOG.rst
CODEOWNERS
Jenkinsfile
LICENSE
Makefile
README.rst
artifact_requirements.txt
environment.sh
extraction_config_example.yaml
pyproject.toml
python_versions.json
src/vivarium/profiling/__init__.py
src/vivarium/profiling/utilities.py
src/vivarium/profiling/components/__init__.py
src/vivarium/profiling/components/risks/effect.py
src/vivarium/profiling/constants/__init__.py
src/vivarium/profiling/constants/data_keys.py
src/vivarium/profiling/constants/data_values.py
src/vivarium/profiling/constants/metadata.py
src/vivarium/profiling/constants/models.py
src/vivarium/profiling/constants/paths.py
src/vivarium/profiling/constants/scenarios.py
src/vivarium/profiling/data/__init__.py
src/vivarium/profiling/data/builder.py
src/vivarium/profiling/data/loader.py
src/vivarium/profiling/model_specifications/model_spec_scaling.yaml
src/vivarium/profiling/model_specifications/branches/scenarios.yaml
src/vivarium/profiling/plugins/artifact.py
src/vivarium/profiling/plugins/parser.py
src/vivarium/profiling/templates/__init__.py
src/vivarium/profiling/templates/analysis_template.ipynb
src/vivarium/profiling/tools/__init__.py
src/vivarium/profiling/tools/app_logging.py
src/vivarium/profiling/tools/cli.py
src/vivarium/profiling/tools/extraction.py
src/vivarium/profiling/tools/make_artifacts.py
src/vivarium/profiling/tools/notebook_generator.py
src/vivarium/profiling/tools/plotting.py
src/vivarium/profiling/tools/run_benchmark.py
src/vivarium/profiling/tools/run_profile.py
src/vivarium/profiling/tools/summarize.py
src/vivarium_profiling.egg-info/PKG-INFO
src/vivarium_profiling.egg-info/SOURCES.txt
src/vivarium_profiling.egg-info/dependency_links.txt
src/vivarium_profiling.egg-info/entry_points.txt
src/vivarium_profiling.egg-info/requires.txt
src/vivarium_profiling.egg-info/top_level.txt
tests/__init__.py
tests/conftest.py
tests/test_cli.py
tests/test_extraction.py
tests/test_run_benchmark.py
tests/test_run_profile.py
tests/test_sample.py
tests/test_summarize.py
tests/plugins/test_parser.py