# Secrets / env (NEVER commit)
.env
.env.*
!.env.example
*.pem
*.key
secrets/
CREDENTIALS.local.md
# Internal-only planning / integration notes (carry engine-internal
# detail; never served, never committed)
*.local.md

# Production data — live runtime/customer databases (NEVER commit)
data/api_keys.db
data/api_keys.db-*
data/*.db
data/*.db-shm
data/*.db-wal

# Regenerable structure caches (multi-GB; rebuilt from public sources)
data/pdb/
data/pdb_bulk/
data/pdb_cache*/
rcsb_cache/

# Python
__pycache__/
*.py[cod]
*$py.class
*.egg-info/
*.egg
build/
dist/
.eggs/

# Pytest
.pytest_cache/
.coverage
htmlcov/

# Virtualenv
.venv/
venv/
env/

# Editor
.vscode/
.idea/
*.swp
*~
.DS_Store

# OS
Thumbs.db

# docs site build output (mkdocs)
site/

# sdk build artifacts
sdk/dist/
sdk/build/
