sample	category	total_reads	aligned_reads	frac_aligned	hq_aligned_reads	hq_aligned_bases	hq_aligned_q20_bases	hq_median_mismatches	mismatch_rate	hq_mismatch_rate	indel_rate	mean_read_length	sd_read_length	median_read_length	mad_read_length	min_read_length	max_read_length	mean_aligned_read_length	aligned_reads_in_pairs	frac_aligned_in_pairs	reads_improperly_paired	frac_reads_improperly_paired	bad_cycles	strand_balance	frac_chimeras	frac_softclipped_reads	frac_hardclipped_reads	mean_3prime_softclipped_bases
NA12891	read1	495	495	1.00000	495	74547	71396	0.00	0.006425	0.006425	0.000054	151.00	0.00	151.00	0.00	151	151	150.60	491	0.99192	0	0.00000	0	0.72323	0.00000	0.00265	0.00000	16.50
NA12891	read2	489	486	0.99387	486	72558	65189	1.00	0.010474	0.010474	0.000041	151.00	0.00	151.00	0.00	151	151	149.30	486	1.00000	0	0.00000	0	0.72016	0.00206	0.01119	0.00000	24.36
NA12891	pair	984	981	0.99695	981	147105	136585	1.00	0.008423	0.008423	0.000048	151.00	0.00	151.00	0.00	151	151	149.96	977	0.99592	0	0.00000	0	0.72171	0.00102	0.00689	0.00000	22.27
