Lane | Sample ID | Sample Ref | Index | Description | Control | Project | Yield (Mbases) | % PF | # Reads | % of raw clusters per lane | % Perfect Index Reads | % One Mismatch Reads (Index) | % of >= Q30 Bases (PF) | Mean Quality Score (PF) |
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1 | SIB910A3_sureselect6 | hg19 | GCCAAT | 454557 | N | 454557 | 4,366 | 100.00 | 43,225,752 | 13.33 | 100.00 | 0.00 | 94.33 | 36.45 |
1 | SIB911A1_sureselect4 | hg19 | TGACCA | 959191 | N | 959191 | 5,230 | 100.00 | 51,778,316 | 15.96 | 100.00 | 0.00 | 94.48 | 36.51 |
1 | SIB911A2_sureselect5 | hg19 | ACAGTG | 959191 | N | 959191 | 3,996 | 100.00 | 39,563,494 | 12.20 | 100.00 | 0.00 | 94.31 | 36.46 |
1 | SIB914A11_sureselect11 | hg19 | GGCTAC | 504910 | N | 504910 | 3,847 | 100.00 | 38,088,672 | 11.74 | 100.00 | 0.00 | 93.71 | 36.27 |
1 | SIB914A12_sureselect12 | hg19 | CTTGTA | 504910 | N | 504910 | 4,868 | 100.00 | 48,201,748 | 14.86 | 100.00 | 0.00 | 94.39 | 36.49 |
1 | SIB914A15_sureselect15 | hg19 | GAAACC | 504910 | N | 504910 | 5,853 | 100.00 | 57,947,620 | 17.87 | 100.00 | 0.00 | 94.32 | 36.46 |
1 | SIB914A2_sureselect2 | hg19 | CGATGT | 504910 | N | 504910 | 3,235 | 100.00 | 32,032,000 | 9.88 | 100.00 | 0.00 | 94.11 | 36.40 |
1 | lane1 | unknown | Undetermined | Clusters with unmatched barcodes for lane 1 | N | Undetermined_indices | 1,366 | 100.00 | 13,520,174 | 4.17 | 0.00 | 0.00 | 91.15 | 35.46 |
2 | SIB910A3_sureselect6 | hg19 | GCCAAT | 454557 | N | 454557 | 4,372 | 100.00 | 43,286,568 | 13.31 | 100.00 | 0.00 | 94.32 | 36.45 |
2 | SIB911A1_sureselect4 | hg19 | TGACCA | 959191 | N | 959191 | 5,234 | 100.00 | 51,823,804 | 15.93 | 100.00 | 0.00 | 94.48 | 36.51 |
2 | SIB911A2_sureselect5 | hg19 | ACAGTG | 959191 | N | 959191 | 4,002 | 100.00 | 39,619,404 | 12.18 | 100.00 | 0.00 | 94.33 | 36.46 |
2 | SIB914A11_sureselect11 | hg19 | GGCTAC | 504910 | N | 504910 | 3,865 | 100.00 | 38,269,896 | 11.76 | 100.00 | 0.00 | 93.70 | 36.27 |
2 | SIB914A12_sureselect12 | hg19 | CTTGTA | 504910 | N | 504910 | 4,867 | 100.00 | 48,191,852 | 14.81 | 100.00 | 0.00 | 94.40 | 36.49 |
2 | SIB914A15_sureselect15 | hg19 | GAAACC | 504910 | N | 504910 | 5,858 | 100.00 | 57,997,530 | 17.83 | 100.00 | 0.00 | 94.33 | 36.46 |
2 | SIB914A2_sureselect2 | hg19 | CGATGT | 504910 | N | 504910 | 3,234 | 100.00 | 32,016,648 | 9.84 | 100.00 | 0.00 | 94.12 | 36.40 |
2 | lane2 | unknown | Undetermined | Clusters with unmatched barcodes for lane 2 | N | Undetermined_indices | 1,424 | 100.00 | 14,103,704 | 4.34 | 0.00 | 0.00 | 91.17 | 35.46 |
SampleID | Recipe | Operator | Directory |
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SIB910A3_sureselect6 | R1 | NN | /home/clinical/DEMUX/150114_D00134_0168_AHB07NADXX/Unaligned/Project_454557/Sample_SIB910A3_sureselect6 |
SIB911A1_sureselect4 | R1 | NN | /home/clinical/DEMUX/150114_D00134_0168_AHB07NADXX/Unaligned/Project_959191/Sample_SIB911A1_sureselect4 |
SIB911A2_sureselect5 | R1 | NN | /home/clinical/DEMUX/150114_D00134_0168_AHB07NADXX/Unaligned/Project_959191/Sample_SIB911A2_sureselect5 |
SIB914A11_sureselect11 | R1 | NN | /home/clinical/DEMUX/150114_D00134_0168_AHB07NADXX/Unaligned/Project_504910/Sample_SIB914A11_sureselect11 |
SIB914A12_sureselect12 | R1 | NN | /home/clinical/DEMUX/150114_D00134_0168_AHB07NADXX/Unaligned/Project_504910/Sample_SIB914A12_sureselect12 |
SIB914A15_sureselect15 | R1 | NN | /home/clinical/DEMUX/150114_D00134_0168_AHB07NADXX/Unaligned/Project_504910/Sample_SIB914A15_sureselect15 |
SIB914A2_sureselect2 | R1 | NN | /home/clinical/DEMUX/150114_D00134_0168_AHB07NADXX/Unaligned/Project_504910/Sample_SIB914A2_sureselect2 |
lane1 | R1 | NN | /home/clinical/DEMUX/150114_D00134_0168_AHB07NADXX/Unaligned/Undetermined_indices/Sample_lane1 |
lane2 | R1 | NN | /home/clinical/DEMUX/150114_D00134_0168_AHB07NADXX/Unaligned/Undetermined_indices/Sample_lane2 |
bcl2fastq-1.8.4