File contains the a formated output of the generated fragments
Matrix saved as: .\test_vs_splitset\gg_split_out\3k2y_no_eff_matrix.json
Trace saved as : .\test_vs_splitset\gg_split_out\3k2y_no_eff_trace.json

Input sequence
==============
ATGACAGGCGATGCAGCCGTCGCATTGGATACAGTCACGGTCGTTGGCGAACGGTATGTCGATGATATTGTGGCAACGTTAACGACGCTCAGAGTGGGTATGGCGGTGTTGCTCCAGCGAGAAAGTGGCAATCAATACGATGATAATGCCATCTCAGTGTGGACGTTGCAACATGCTAAGTTAGGCTACATTGCCCGGTATCAGAACCAGCCGTACGCGACACTGATGGATCAGGGGCAACGATTGTATGGCATCGTGACGGTATTGGATCAGCAAAAACAGCATCTTGAATTGATGCTATGGCGG

Lenght of input: 306
Parameters Used
===============
	Lower limit of fragment length: 20
	Upper limit of fragment length: 100
	Start position index          : 0
	Efficenfy weight              : 0.0
	Fidility weight               : 1
	Number of output traces       : 5
	5' overhang                   : 
	3' overhang                   : 
	Initiation score              : 1
	Excluded positions            : 

Tracebacks(Predictions)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Traceback 1
+++++++++++
Score (higher is better)            : 0.98
Fragmentation positions(starts at 0): 236 ,169 ,118 ,47 ,0
Net ligation efficency              : 24.17 %
Net Fidility (accuracy)             : 97.72 %
Net success rate                    : 23.62 %

Numbering 100s:                                                                                                       1                                                                                                   2                                                                                                   3     
Numbering  10s:             1         2         3         4         5         6         7         8         9         0         1         2         3         4         5         6         7         8         9         0         1         2         3         4         5         6         7         8         9         0     
Numbering   1s:   012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
Sequence      :5'-ATGACAGGCGATGCAGCCGTCGCATTGGATACAGTCACGGTCGTTGGCGAACGGTATGTCGATGATATTGTGGCAACGTTAACGACGCTCAGAGTGGGTATGGCGGTGTTGCTCCAGCGAGAAAGTGGCAATCAATACGATGATAATGCCATCTCAGTGTGGACGTTGCAACATGCTAAGTTAGGCTACATTGCCCGGTATCAGAACCAGCCGTACGCGACACTGATGGATCAGGGGCAACGATTGTATGGCATCGTGACGGTATTGGATCAGCAAAAACAGCATCTTGAATTGATGCTATGGCGG-3'
Break points  :                                                  ^                                                                      ^                                                  ^                                                                  ^                                                                     

Fragments
---------
Fragment 1
Range 0-47; length: 51 ; length with additions: 51
5' and 3' efficencies: -, 82.25; 5' and 3' fidilities: -, 99.24
Overhangs sites   :   mmmm                                           mmmm
Sequence          :5'-ATGACAGGCGATGCAGCCGTCGCATTGGATACAGTCACGGTCGTTGGCGAA-3'
Reverse complement:3'-TACTGTCCGCTACGTCGGCAGCGTAACCTATGTCAGTGCCAGCAACCGCTT-5'
Non ATCG bases    :                                                      

Fragment 2
Range 47-118; length: 75 ; length with additions: 75
5' and 3' efficencies: 82.25, 64.73; 5' and 3' fidilities: 99.24, 99.49
Overhangs sites   :   mmmm                                                                   mmmm
Sequence          :5'-CGAACGGTATGTCGATGATATTGTGGCAACGTTAACGACGCTCAGAGTGGGTATGGCGGTGTTGCTCCAGCGAGA-3'
Reverse complement:3'-GCTTGCCATACAGCTACTATAACACCGTTGCAATTGCTGCGAGTCTCACCCATACCGCCACAACGAGGTCGCTCT-5'
Non ATCG bases    :                                                                              

Fragment 3
Range 118-169; length: 55 ; length with additions: 55
5' and 3' efficencies: 64.73, 69.65; 5' and 3' fidilities: 99.49, 99.75
Overhangs sites   :   mmmm                                               mmmm
Sequence          :5'-GAGAAAGTGGCAATCAATACGATGATAATGCCATCTCAGTGTGGACGTTGCAACA-3'
Reverse complement:3'-CTCTTTCACCGTTAGTTATGCTACTATTACGGTAGAGTCACACCTGCAACGTTGT-5'
Non ATCG bases    :                                                          

Fragment 4
Range 169-236; length: 71 ; length with additions: 71
5' and 3' efficencies: 69.65, 65.19; 5' and 3' fidilities: 99.75, 99.23
Overhangs sites   :   mmmm                                                               mmmm
Sequence          :5'-AACATGCTAAGTTAGGCTACATTGCCCGGTATCAGAACCAGCCGTACGCGACACTGATGGATCAGGGGCAA-3'
Reverse complement:3'-TTGTACGATTCAATCCGATGTAACGGGCCATAGTCTTGGTCGGCATGCGCTGTGACTACCTAGTCCCCGTT-5'
Non ATCG bases    :                                                                          

Fragment 5
Range 236-307; length: 70 ; length with additions: 70
5' and 3' efficencies: 65.19, -; 5' and 3' fidilities: 99.23, -
Overhangs sites   :   mmmm                                                              mmmm
Sequence          :5'-GCAACGATTGTATGGCATCGTGACGGTATTGGATCAGCAAAAACAGCATCTTGAATTGATGCTATGGCGG-3'
Reverse complement:3'-CGTTGCTAACATACCGTAGCACTGCCATAACCTAGTCGTTTTTGTCGTAGAACTTAACTACGATACCGCC-5'
Non ATCG bases    :                                                                         


------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Traceback 2
+++++++++++
Score (higher is better)            : 0.98
Fragmentation positions(starts at 0): 274 ,205 ,118 ,47 ,0
Net ligation efficency              :  8.44 %
Net Fidility (accuracy)             : 97.59 %
Net success rate                    :  8.24 %

Numbering 100s:                                                                                                       1                                                                                                   2                                                                                                   3     
Numbering  10s:             1         2         3         4         5         6         7         8         9         0         1         2         3         4         5         6         7         8         9         0         1         2         3         4         5         6         7         8         9         0     
Numbering   1s:   012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
Sequence      :5'-ATGACAGGCGATGCAGCCGTCGCATTGGATACAGTCACGGTCGTTGGCGAACGGTATGTCGATGATATTGTGGCAACGTTAACGACGCTCAGAGTGGGTATGGCGGTGTTGCTCCAGCGAGAAAGTGGCAATCAATACGATGATAATGCCATCTCAGTGTGGACGTTGCAACATGCTAAGTTAGGCTACATTGCCCGGTATCAGAACCAGCCGTACGCGACACTGATGGATCAGGGGCAACGATTGTATGGCATCGTGACGGTATTGGATCAGCAAAAACAGCATCTTGAATTGATGCTATGGCGG-3'
Break points  :                                                  ^                                                                      ^                                                                                      ^                                                                    ^                               

Fragments
---------
Fragment 1
Range 0-47; length: 51 ; length with additions: 51
5' and 3' efficencies: -, 82.25; 5' and 3' fidilities: -, 99.24
Overhangs sites   :   mmmm                                           mmmm
Sequence          :5'-ATGACAGGCGATGCAGCCGTCGCATTGGATACAGTCACGGTCGTTGGCGAA-3'
Reverse complement:3'-TACTGTCCGCTACGTCGGCAGCGTAACCTATGTCAGTGCCAGCAACCGCTT-5'
Non ATCG bases    :                                                      

Fragment 2
Range 47-118; length: 75 ; length with additions: 75
5' and 3' efficencies: 82.25, 64.73; 5' and 3' fidilities: 99.24, 99.49
Overhangs sites   :   mmmm                                                                   mmmm
Sequence          :5'-CGAACGGTATGTCGATGATATTGTGGCAACGTTAACGACGCTCAGAGTGGGTATGGCGGTGTTGCTCCAGCGAGA-3'
Reverse complement:3'-GCTTGCCATACAGCTACTATAACACCGTTGCAATTGCTGCGAGTCTCACCCATACCGCCACAACGAGGTCGCTCT-5'
Non ATCG bases    :                                                                              

Fragment 3
Range 118-205; length: 91 ; length with additions: 91
5' and 3' efficencies: 64.73, 75.44; 5' and 3' fidilities: 99.49, 99.20
Overhangs sites   :   mmmm                                                                                   mmmm
Sequence          :5'-GAGAAAGTGGCAATCAATACGATGATAATGCCATCTCAGTGTGGACGTTGCAACATGCTAAGTTAGGCTACATTGCCCGGTATCAGAACCA-3'
Reverse complement:3'-CTCTTTCACCGTTAGTTATGCTACTATTACGGTAGAGTCACACCTGCAACGTTGTACGATTCAATCCGATGTAACGGGCCATAGTCTTGGT-5'
Non ATCG bases    :                                                                                              

Fragment 4
Range 205-274; length: 73 ; length with additions: 73
5' and 3' efficencies: 75.44, 21.01; 5' and 3' fidilities: 99.20, 99.64
Overhangs sites   :   mmmm                                                                 mmmm
Sequence          :5'-ACCAGCCGTACGCGACACTGATGGATCAGGGGCAACGATTGTATGGCATCGTGACGGTATTGGATCAGCAAAA-3'
Reverse complement:3'-TGGTCGGCATGCGCTGTGACTACCTAGTCCCCGTTGCTAACATACCGTAGCACTGCCATAACCTAGTCGTTTT-5'
Non ATCG bases    :                                                                            

Fragment 5
Range 274-307; length: 32 ; length with additions: 32
5' and 3' efficencies: 21.01, -; 5' and 3' fidilities: 99.64, -
Overhangs sites   :   mmmm                        mmmm
Sequence          :5'-AAAAACAGCATCTTGAATTGATGCTATGGCGG-3'
Reverse complement:3'-TTTTTGTCGTAGAACTTAACTACGATACCGCC-5'
Non ATCG bases    :                                   


------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Traceback 3
+++++++++++
Score (higher is better)            : 0.98
Fragmentation positions(starts at 0): 275 ,205 ,118 ,47 ,0
Net ligation efficency              :  8.44 %
Net Fidility (accuracy)             : 97.59 %
Net success rate                    :  8.24 %

Numbering 100s:                                                                                                       1                                                                                                   2                                                                                                   3     
Numbering  10s:             1         2         3         4         5         6         7         8         9         0         1         2         3         4         5         6         7         8         9         0         1         2         3         4         5         6         7         8         9         0     
Numbering   1s:   012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
Sequence      :5'-ATGACAGGCGATGCAGCCGTCGCATTGGATACAGTCACGGTCGTTGGCGAACGGTATGTCGATGATATTGTGGCAACGTTAACGACGCTCAGAGTGGGTATGGCGGTGTTGCTCCAGCGAGAAAGTGGCAATCAATACGATGATAATGCCATCTCAGTGTGGACGTTGCAACATGCTAAGTTAGGCTACATTGCCCGGTATCAGAACCAGCCGTACGCGACACTGATGGATCAGGGGCAACGATTGTATGGCATCGTGACGGTATTGGATCAGCAAAAACAGCATCTTGAATTGATGCTATGGCGG-3'
Break points  :                                                  ^                                                                      ^                                                                                      ^                                                                     ^                              

Fragments
---------
Fragment 1
Range 0-47; length: 51 ; length with additions: 51
5' and 3' efficencies: -, 82.25; 5' and 3' fidilities: -, 99.24
Overhangs sites   :   mmmm                                           mmmm
Sequence          :5'-ATGACAGGCGATGCAGCCGTCGCATTGGATACAGTCACGGTCGTTGGCGAA-3'
Reverse complement:3'-TACTGTCCGCTACGTCGGCAGCGTAACCTATGTCAGTGCCAGCAACCGCTT-5'
Non ATCG bases    :                                                      

Fragment 2
Range 47-118; length: 75 ; length with additions: 75
5' and 3' efficencies: 82.25, 64.73; 5' and 3' fidilities: 99.24, 99.49
Overhangs sites   :   mmmm                                                                   mmmm
Sequence          :5'-CGAACGGTATGTCGATGATATTGTGGCAACGTTAACGACGCTCAGAGTGGGTATGGCGGTGTTGCTCCAGCGAGA-3'
Reverse complement:3'-GCTTGCCATACAGCTACTATAACACCGTTGCAATTGCTGCGAGTCTCACCCATACCGCCACAACGAGGTCGCTCT-5'
Non ATCG bases    :                                                                              

Fragment 3
Range 118-205; length: 91 ; length with additions: 91
5' and 3' efficencies: 64.73, 75.44; 5' and 3' fidilities: 99.49, 99.20
Overhangs sites   :   mmmm                                                                                   mmmm
Sequence          :5'-GAGAAAGTGGCAATCAATACGATGATAATGCCATCTCAGTGTGGACGTTGCAACATGCTAAGTTAGGCTACATTGCCCGGTATCAGAACCA-3'
Reverse complement:3'-CTCTTTCACCGTTAGTTATGCTACTATTACGGTAGAGTCACACCTGCAACGTTGTACGATTCAATCCGATGTAACGGGCCATAGTCTTGGT-5'
Non ATCG bases    :                                                                                              

Fragment 4
Range 205-275; length: 74 ; length with additions: 74
5' and 3' efficencies: 75.44, 21.01; 5' and 3' fidilities: 99.20, 99.64
Overhangs sites   :   mmmm                                                                  mmmm
Sequence          :5'-ACCAGCCGTACGCGACACTGATGGATCAGGGGCAACGATTGTATGGCATCGTGACGGTATTGGATCAGCAAAAA-3'
Reverse complement:3'-TGGTCGGCATGCGCTGTGACTACCTAGTCCCCGTTGCTAACATACCGTAGCACTGCCATAACCTAGTCGTTTTT-5'
Non ATCG bases    :                                                                             

Fragment 5
Range 275-307; length: 31 ; length with additions: 31
5' and 3' efficencies: 21.01, -; 5' and 3' fidilities: 99.64, -
Overhangs sites   :   mmmm                       mmmm
Sequence          :5'-AAAACAGCATCTTGAATTGATGCTATGGCGG-3'
Reverse complement:3'-TTTTGTCGTAGAACTTAACTACGATACCGCC-5'
Non ATCG bases    :                                  


------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Traceback 4
+++++++++++
Score (higher is better)            : 0.97
Fragmentation positions(starts at 0): 273 ,202 ,169 ,72 ,0
Net ligation efficency              :  7.64 %
Net Fidility (accuracy)             : 97.35 %
Net success rate                    :  7.43 %

Numbering 100s:                                                                                                       1                                                                                                   2                                                                                                   3     
Numbering  10s:             1         2         3         4         5         6         7         8         9         0         1         2         3         4         5         6         7         8         9         0         1         2         3         4         5         6         7         8         9         0     
Numbering   1s:   012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
Sequence      :5'-ATGACAGGCGATGCAGCCGTCGCATTGGATACAGTCACGGTCGTTGGCGAACGGTATGTCGATGATATTGTGGCAACGTTAACGACGCTCAGAGTGGGTATGGCGGTGTTGCTCCAGCGAGAAAGTGGCAATCAATACGATGATAATGCCATCTCAGTGTGGACGTTGCAACATGCTAAGTTAGGCTACATTGCCCGGTATCAGAACCAGCCGTACGCGACACTGATGGATCAGGGGCAACGATTGTATGGCATCGTGACGGTATTGGATCAGCAAAAACAGCATCTTGAATTGATGCTATGGCGG-3'
Break points  :                                                                           ^                                                                                                ^                                ^                                                                      ^                                

Fragments
---------
Fragment 1
Range 0-72; length: 76 ; length with additions: 76
5' and 3' efficencies: -, 65.19; 5' and 3' fidilities: -, 99.23
Overhangs sites   :   mmmm                                                                    mmmm
Sequence          :5'-ATGACAGGCGATGCAGCCGTCGCATTGGATACAGTCACGGTCGTTGGCGAACGGTATGTCGATGATATTGTGGCAA-3'
Reverse complement:3'-TACTGTCCGCTACGTCGGCAGCGTAACCTATGTCAGTGCCAGCAACCGCTTGCCATACAGCTACTATAACACCGTT-5'
Non ATCG bases    :                                                                               

Fragment 2
Range 72-169; length: 101 ; length with additions: 101
5' and 3' efficencies: 65.19, 69.65; 5' and 3' fidilities: 99.23, 99.75
Overhangs sites   :   mmmm                                                                                             mmmm
Sequence          :5'-GCAACGTTAACGACGCTCAGAGTGGGTATGGCGGTGTTGCTCCAGCGAGAAAGTGGCAATCAATACGATGATAATGCCATCTCAGTGTGGACGTTGCAACA-3'
Reverse complement:3'-CGTTGCAATTGCTGCGAGTCTCACCCATACCGCCACAACGAGGTCGCTCTTTCACCGTTAGTTATGCTACTATTACGGTAGAGTCACACCTGCAACGTTGT-5'
Non ATCG bases    :                                                                                                        

Fragment 3
Range 169-202; length: 37 ; length with additions: 37
5' and 3' efficencies: 69.65, 38.08; 5' and 3' fidilities: 99.75, 99.14
Overhangs sites   :   mmmm                             mmmm
Sequence          :5'-AACATGCTAAGTTAGGCTACATTGCCCGGTATCAGAA-3'
Reverse complement:3'-TTGTACGATTCAATCCGATGTAACGGGCCATAGTCTT-5'
Non ATCG bases    :                                        

Fragment 4
Range 202-273; length: 75 ; length with additions: 75
5' and 3' efficencies: 38.08, 44.18; 5' and 3' fidilities: 99.14, 99.20
Overhangs sites   :   mmmm                                                                   mmmm
Sequence          :5'-AGAACCAGCCGTACGCGACACTGATGGATCAGGGGCAACGATTGTATGGCATCGTGACGGTATTGGATCAGCAAA-3'
Reverse complement:3'-TCTTGGTCGGCATGCGCTGTGACTACCTAGTCCCCGTTGCTAACATACCGTAGCACTGCCATAACCTAGTCGTTT-5'
Non ATCG bases    :                                                                              

Fragment 5
Range 273-307; length: 33 ; length with additions: 33
5' and 3' efficencies: 44.18, -; 5' and 3' fidilities: 99.20, -
Overhangs sites   :   mmmm                         mmmm
Sequence          :5'-CAAAAACAGCATCTTGAATTGATGCTATGGCGG-3'
Reverse complement:3'-GTTTTTGTCGTAGAACTTAACTACGATACCGCC-5'
Non ATCG bases    :                                    


------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Traceback 5
+++++++++++
Score (higher is better)            : 0.97
Fragmentation positions(starts at 0): 276 ,202 ,169 ,72 ,0
Net ligation efficency              : 16.15 %
Net Fidility (accuracy)             : 97.31 %
Net success rate                    : 15.72 %

Numbering 100s:                                                                                                       1                                                                                                   2                                                                                                   3     
Numbering  10s:             1         2         3         4         5         6         7         8         9         0         1         2         3         4         5         6         7         8         9         0         1         2         3         4         5         6         7         8         9         0     
Numbering   1s:   012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
Sequence      :5'-ATGACAGGCGATGCAGCCGTCGCATTGGATACAGTCACGGTCGTTGGCGAACGGTATGTCGATGATATTGTGGCAACGTTAACGACGCTCAGAGTGGGTATGGCGGTGTTGCTCCAGCGAGAAAGTGGCAATCAATACGATGATAATGCCATCTCAGTGTGGACGTTGCAACATGCTAAGTTAGGCTACATTGCCCGGTATCAGAACCAGCCGTACGCGACACTGATGGATCAGGGGCAACGATTGTATGGCATCGTGACGGTATTGGATCAGCAAAAACAGCATCTTGAATTGATGCTATGGCGG-3'
Break points  :                                                                           ^                                                                                                ^                                ^                                                                         ^                             

Fragments
---------
Fragment 1
Range 0-72; length: 76 ; length with additions: 76
5' and 3' efficencies: -, 65.19; 5' and 3' fidilities: -, 99.23
Overhangs sites   :   mmmm                                                                    mmmm
Sequence          :5'-ATGACAGGCGATGCAGCCGTCGCATTGGATACAGTCACGGTCGTTGGCGAACGGTATGTCGATGATATTGTGGCAA-3'
Reverse complement:3'-TACTGTCCGCTACGTCGGCAGCGTAACCTATGTCAGTGCCAGCAACCGCTTGCCATACAGCTACTATAACACCGTT-5'
Non ATCG bases    :                                                                               

Fragment 2
Range 72-169; length: 101 ; length with additions: 101
5' and 3' efficencies: 65.19, 69.65; 5' and 3' fidilities: 99.23, 99.75
Overhangs sites   :   mmmm                                                                                             mmmm
Sequence          :5'-GCAACGTTAACGACGCTCAGAGTGGGTATGGCGGTGTTGCTCCAGCGAGAAAGTGGCAATCAATACGATGATAATGCCATCTCAGTGTGGACGTTGCAACA-3'
Reverse complement:3'-CGTTGCAATTGCTGCGAGTCTCACCCATACCGCCACAACGAGGTCGCTCTTTCACCGTTAGTTATGCTACTATTACGGTAGAGTCACACCTGCAACGTTGT-5'
Non ATCG bases    :                                                                                                        

Fragment 3
Range 169-202; length: 37 ; length with additions: 37
5' and 3' efficencies: 69.65, 38.08; 5' and 3' fidilities: 99.75, 99.14
Overhangs sites   :   mmmm                             mmmm
Sequence          :5'-AACATGCTAAGTTAGGCTACATTGCCCGGTATCAGAA-3'
Reverse complement:3'-TTGTACGATTCAATCCGATGTAACGGGCCATAGTCTT-5'
Non ATCG bases    :                                        

Fragment 4
Range 202-276; length: 78 ; length with additions: 78
5' and 3' efficencies: 38.08, 93.42; 5' and 3' fidilities: 99.14, 99.17
Overhangs sites   :   mmmm                                                                      mmmm
Sequence          :5'-AGAACCAGCCGTACGCGACACTGATGGATCAGGGGCAACGATTGTATGGCATCGTGACGGTATTGGATCAGCAAAAAC-3'
Reverse complement:3'-TCTTGGTCGGCATGCGCTGTGACTACCTAGTCCCCGTTGCTAACATACCGTAGCACTGCCATAACCTAGTCGTTTTTG-5'
Non ATCG bases    :                                                                                 

Fragment 5
Range 276-307; length: 30 ; length with additions: 30
5' and 3' efficencies: 93.42, -; 5' and 3' fidilities: 99.17, -
Overhangs sites   :   mmmm                      mmmm
Sequence          :5'-AAACAGCATCTTGAATTGATGCTATGGCGG-3'
Reverse complement:3'-TTTGTCGTAGAACTTAACTACGATACCGCC-5'
Non ATCG bases    :                                 


------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
