numpy
pandas
scipy
scanpy
anndata
joblib
tqdm
scikit-learn
matplotlib

[all]
spatialdata
spatialdata-io
spatialdata-plot
pydeseq2
fireducks
pytest
pytest-cov

[deseq]
pydeseq2

[docs]
sphinx>=6.2.1
sphinx-rtd-theme>=2.0.0
myst-parser>=2.0.0

[fast]
fireducks

[spatial]
spatialdata
spatialdata-io
spatialdata-plot

[test]
pytest
pytest-cov
