S1_bismark_bt2_pe.deduplicated.bam

Bismark Extractor Version: v0.24.1

Processed 691665 lines in total
Total number of methylation call strings processed: 691665

Final Cytosine Methylation Report
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Total number of C's analysed:	17820000

Total methylated C's in CpG context:	2740000
Total methylated C's in CHG context:	36500
Total methylated C's in CHH context:	52200
Total methylated C's in Unknown context (CN or CHN):	1500

Total unmethylated C's in CpG context:	960000
Total unmethylated C's in CHG context:	6870000
Total unmethylated C's in CHH context:	7160000
Total unmethylated C's in Unknown context (CN or CHN):	15800

C methylated in CpG context:	74.1%
C methylated in CHG context:	0.5%
C methylated in CHH context:	0.7%
C methylated in unknown context (CN or CHN):	8.7%
