.gitignore
CITATION.md
LICENSE.md
Readme.md
guide.md
pyproject.toml
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.github/workflows/pypi_publish.yml
docs/Makefile
docs/make.bat
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modifinder/__init__.py
modifinder/_version.py
modifinder/arguments.json
modifinder/arguments.py
modifinder/convert.py
modifinder/exceptions.py
modifinder/main.py
modifinder/runner.py
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modifinder.egg-info/requires.txt
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modifinder/classes/Compound.py
modifinder/classes/EdgeDetail.py
modifinder/classes/ModiFinder.py
modifinder/classes/Spectrum.py
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modifinder/engines/Abtracts.py
modifinder/engines/__init__.py
modifinder/engines/alignment/CosineAlignmentEngine.py
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modifinder/engines/annotation/MAGMaAnnotationEngine.py
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modifinder/engines/evaluation/BasicEvaluationEngine.py
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modifinder/engines/tests/test_MagmaAnnotationEngine.py
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modifinder/samples/__init__.py
modifinder/samples/caffeine.py
modifinder/samples/theophylline.py
modifinder/tests/__init__.py
modifinder/tests/test_convert.py
modifinder/tests/utils.py
modifinder/utilities/__init__.py
modifinder/utilities/general_utils.py
modifinder/utilities/gnps_types.py
modifinder/utilities/mol_utils.py
modifinder/utilities/network.py
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