# Python bytecode and caches
__pycache__/
*.py[cod]
*.so

# Packaging artifacts
*.egg
*.egg-info/
dist/
build/
eggs/
parts/
sdist/
develop-eggs/
.installed.cfg
lib/
lib64/

# Virtual environments
venv/
.venv/
env/
ENV/
env.bak/
venv.bak/

# Saved Outputs
*.csv
*.png
*.jpg
*.xlsx
*.pdf

# Jupyter Notebooks
amacfa_local_example.ipynb
segmentation_watershed.ipynb
amacfa_full_example copy.ipynb
amacfa_bulk_run.ipynb

# Extraneous .py files
statistical_analysis_example.py
basic_analysis.py

# Jupyter notebook checkpoints
.ipynb_checkpoints/

# Environment variables
.env

# Local configuration files
settings.local.json

# macOS system files
.DS_Store

# VSCode personal settings
.vscode/