defusedxml
gemmi
graypy
healpy
icebreaker-em
imagecodecs
ispyb>=11.1.2
mrcfile
numpy
pillow
plotly
pydantic>=2
readlif
requests
SimpleITK
starfile
stomp-py>8.1.1
tifffile
txrm2tiff
workflows>=3

[dev]
bump-my-version
ipykernel
pre-commit
pytest
pytest-datafiles
pytest-mock

[easymode]
huggingface_hub
tensorflow[and-cuda]

[murfey_db]
murfey[server]

[torch]
membrain-seg
topaz-em
torch==2.11.0
