mdprep/__init__.py,sha256=U52atAPJTf3oUvg2_Hhf_XtBd34mM2lfWbldor808mc,108
mdprep/cli.py,sha256=KlJuNstduOXxYG9XAYGnVteUp3JgbBvgAKTRXgu5IV4,33405
mdprep/_selftest_data/basic_protein.yaml,sha256=II2s1MHqocorravC0oN9llxTXWDTzxNKKfBgKthLCB4,479
mdprep/_selftest_data/ligand_sub.mol2,sha256=iYr_D00W0hwMt-fHF8QSaZqYFWHm6cBoEisuaARNb00,268
mdprep/ambertools/__init__.py,sha256=11IDxd6TOTzyt3V5WKI8KVhtntDlA3YwmgyYUFdO_Xo,36
mdprep/ambertools/antechamber.py,sha256=42T2J2b8hQUscIi6LMk6IGfYrW0OgnabuZM7C1zoEBU,2943
mdprep/ambertools/commands.py,sha256=HtpDZkWUUXZutxFt3KdR1kTJvQr-kvOgY9E6S_rWgs4,997
mdprep/ambertools/mol2.py,sha256=tDGMttatk4PTCmCmP7gHPwCqOwKuvRlLX9CDvpcdKGY,15561
mdprep/ambertools/parmchk2.py,sha256=l1hpzfDDCzwmeUIL4MnqhEpyD97P2CICYjt8CHpEIHI,2540
mdprep/ambertools/resp.py,sha256=o0fbYa05NiWNOsNDwUwoKFwmUhRV-yfR4cQKQUoWeaE,20234
mdprep/analysis/__init__.py,sha256=sO2bpYe4tXYEk2C-OhXCiKroIloec2yJ63LEl-_t_H0,247
mdprep/analysis/charges.py,sha256=I3m289ACBnnMa6s15EU0xflUbyRgybYnMAD-OOMdC9c,7515
mdprep/analysis/dcd.py,sha256=vZGOMDswf7jb4D78EeaB6K_jY2jLkJvhFS9DJGEoYPg,4168
mdprep/analysis/equilibration.py,sha256=dk5W4KZs1QCi_YJ6dW7zst-O66lr4kjpS-FmnNkVPBQ,3061
mdprep/analysis/metal_site.py,sha256=q728UJCoGkcvjJ6ywzqBgi8CH2m1--wHZPX-zRMUoFA,3006
mdprep/analysis/prmtop.py,sha256=dBz1xSC55lOmLIdGARyu4UbB-opR5tf4-oYGrxxzumg,9063
mdprep/analysis/trajectory.py,sha256=f2ijrpsNrIYyZf16Zr1_9lR8QdfDEAkqvtMJ6UMb8Z4,14459
mdprep/charges/__init__.py,sha256=orUoBoYV7N85A0Z2XBp8HHYrbz2ZW3Z5CvHkZoQESc4,38
mdprep/charges/esp_grid.py,sha256=ShSWr5IQ0iLsuquzyOaX_GZm9vhLyRkLcx1Z9PA-EbM,6430
mdprep/config/__init__.py,sha256=dgn349blqEXMOMGDbl5GTAy7IcmeNeQi1L7HC6UzqUY,228
mdprep/config/decisions.py,sha256=36DB6hyhvl4oliex9zgaeDMl9InsobWIIB1qbcquIrU,123771
mdprep/config/loader.py,sha256=2H1i4swe6_JqP62Pd_tGy9cbVS5-E9u7YqaMf8l8KcM,5961
mdprep/config/models.py,sha256=QvFYcODzQjWbGUd5SoZ8BW0sf6Q1XpGbmHo_T7YXVvQ,65192
mdprep/external/__init__.py,sha256=XFwbRVVJr_q6VPdPQBpbeWBYQtFXX-c3gimVZSKPKqQ,328
mdprep/external/discovery.py,sha256=VEm5kYk4WUP6WmgkZqxjRQkMgM_QzA4iTEFIFcjhvrY,318
mdprep/external/runner.py,sha256=bXYeyYff3JA9s49Rs3X-fSvnb92V4J6urVkx92D4TLE,1421
mdprep/leap/__init__.py,sha256=XOmJw8MMe0urNrQfrafCgKz3w0_fR_ZHD15TkDbgRjs,35
mdprep/leap/builder.py,sha256=UqXm6xhzSTVsOT4YA4UH8Szk2kWfURGgYZQuKbnoMQg,19746
mdprep/leap/forcefields.py,sha256=YuBZlPU1Bah3gaXy1741PQlDkG1tM7jxuuPx9gHsYhM,2275
mdprep/leap/ions.py,sha256=hZbyS2OE7dkF9K-W9poVDhcw7rXVmuUKIv5MEnFAH2o,3555
mdprep/leap/log_parser.py,sha256=M8jLcXZvJAbimBA5bCCwcN4OqRHwTLuIk_TCNEi5Gk0,7027
mdprep/leap/report.py,sha256=1mNvP1YP2CQSic98Qbnh22t9DrhE31greMUepIe9kSg,3773
mdprep/leap/residues.py,sha256=A2-81Ayluldfdugbk-4NOt3HIgxqoepFsJRWQWQQHfw,28500
mdprep/leap/runner.py,sha256=QDOL7wksI_OmEx8tH_9sDmYNqyj2q0Zgvi8H2dlq0ZQ,2028
mdprep/ligands/__init__.py,sha256=2lyVnqZFYfVrTYZe7tvmXynobk8kPGmWBSkgaPQ6XdE,57
mdprep/ligands/extract.py,sha256=DUjwq1eLZZEhOfmUIp1X6gWzlsDgQUnxrZxIQ-ByJjY,14919
mdprep/ligands/hydrogenate.py,sha256=aNugV0-8sSydBmeiptkbpXhUFendjs0Yeee2w7LqsiA,16223
mdprep/ligands/identity.py,sha256=PJGvIIpQ6o1ZyCo-dOkwLFIOkCMeyUiwQ7X5dmrpFV0,1151
mdprep/ligands/pyscf_charges.py,sha256=iNUbz518lKVHTZQGAklv7CEYkwo15_AUx_XrO8LxoDk,10730
mdprep/ligands/report.py,sha256=Fy0Z0JM9bWrenKrkzwBN3FBjFNZ93K47hv-HJJ5u0PI,5782
mdprep/ligands/workflow.py,sha256=yTrTX1amQs14QzwNcYKlcdr5eslT22wQ8SgYkZYmVRI,38101
mdprep/md/__init__.py,sha256=IxNFQXkdY5aoFQEQgw_JwHzFFj6lvbycNF36ayP99g8,168
mdprep/md/imaging.py,sha256=j6UJr5Kwr4Z2fLxxE0hyaMKR0fQCvEqeR5FyGozfFO8,5835
mdprep/md/roe_brooks.py,sha256=caKqsEN7sENbVx9_gTxsskY7oa4yO9CsWdTl_2VYnLw,36186
mdprep/metals/__init__.py,sha256=9JFeDdF8kzl554wFX93bqmCwpXfY5VSQn490hpiZ6pU,41
mdprep/metals/c4.py,sha256=6-cBuJ76-6vL8Ejw2ahmn3j3GQtHJJXwXb0XcvlUqpc,5696
mdprep/metals/coordination.py,sha256=FqS5gWZvL8wLJ2qZj-x2ZW6RcxdKoiLxYK0CHZ5b17s,11998
mdprep/metals/gxtb_hessian.py,sha256=YKXFNsoLZIn29R3DsKNHz32Fy7cOMORU3jUVCEg4RmY,18605
mdprep/metals/hydrogenate.py,sha256=sgrJFqKnEa0ak0aLlqKH6C5x7-GorOoZhIKVCWgl9NY,12768
mdprep/metals/mace_polar1_hessian.py,sha256=9Y-lcrdM4KKl7gYmPu9M1s6RFYTxRgMx28ciCBfG0Gc,13433
mdprep/metals/mace_polar1_worker.py,sha256=O9xQQ_npvcY9t03ghhX9Ew9w5sbrQmTuQPjrHuH_jDk,10468
mdprep/metals/mcpb.py,sha256=Q1vrwVk-gzV3UeIRM3j8YpvTba6H0Gl0aWg1YCtXbpY,69029
mdprep/metals/mcpb_compat.py,sha256=h2cWsJt7pGZk1ud8zktHYTVUluWUNKx3bwDdUaO_XVw,4225
mdprep/metals/nonbonded.py,sha256=xe5tBhXXCorZY5_V3qM58Icc5bMMvGu-ItXOX6ChWRE,11083
mdprep/metals/parameter_comparison.py,sha256=Ygcn0gQaS97VuhtjdmPVklS2TGGLKU-oTm8aH27hxaQ,21189
mdprep/metals/pyscf_mcpb.py,sha256=Wx8mEmPbtnmF8Us4Az86iAJm1HBtL4ba7SwoUfJuK7c,60887
mdprep/metals/report.py,sha256=0iDO1NwuJDRNYlF5OyVP6wsY268AXpXKlHTYj2XKUGs,6026
mdprep/metals/through_metal.py,sha256=iyD54aq5xiMtbQqGrrqmsQVFsKuyai9MIqOiuakmCmA,5927
mdprep/metals/workflow.py,sha256=F7jvK43oU5tlXvRAvGxjfqQKPvqhxgY_AaOdDDO9eRU,14072
mdprep/protonation/__init__.py,sha256=DU8KQh6gAaM_zfdnvtZLSCtuM2kbtJ2nYv_dNQgjuFQ,465
mdprep/protonation/apply.py,sha256=tvHRxgBdhllg1gN7tacB8WTr6_9LXOyP5I56OW11JT0,40562
mdprep/protonation/disulfide_states.py,sha256=0R4yHQXuSfboqKT3Gzv7TRMmoC7A77CtUbJCsvLRgIQ,4949
mdprep/protonation/histidine_geometry.py,sha256=EJTRq6DlsF4yN5H7qcHkHK7G6CRtKlV-ZWPdZIxmXbQ,37018
mdprep/protonation/histidine_qmmm.py,sha256=FWTnbhQjKHwg6vKgNQZAXSt7cxuTjq3OPimMhx4d4GQ,21954
mdprep/protonation/histidine_xtb.py,sha256=g4zT-YvTNGAySfevCIAnP50Lxps5WpUEzJxFh3Kl8K0,35981
mdprep/protonation/overrides.py,sha256=DWa4avlXA0hssUNW0QmQHJdjwiYj4eZcd2nWbl0-CwE,2203
mdprep/protonation/pka_rules.py,sha256=vgfn4d8pmMJwvjG6NjICtl8crUIDBFxumpUNI7g8pvM,5221
mdprep/protonation/propka.py,sha256=TUauk9MzmVbQZaOrGkYeh3dW3ex_d9UZcwQPoE7KqVg,6188
mdprep/protonation/propka_parser.py,sha256=fteCohJq2heO1UsCScve_sxgt3R66IFlocTXTP9akbo,4502
mdprep/protonation/report.py,sha256=cBcsKVf_7OVo3YwvzPHtOzE8fRm6AhrVgIpyFarWwmk,7156
mdprep/protonation/states.py,sha256=W2pT9FskDmErCyq8MrBXt9tilZE6vypv4x-YSlNkttQ,1590
mdprep/protonation/temporary_hydrogenation.py,sha256=Tbo9gChovsjxRFkWh_20hnOHO2GQGeMijAk88GSMyKs,16758
mdprep/protonation/xtb_parser.py,sha256=c0SZlYBqikomIUTNxrG_LSGFJpN-s5UKWEFLc5CZ8bw,2430
mdprep/protonation/xtb_runner.py,sha256=QHgk8KBj8kzNsNxRX0Y2VbA0B0d6bkGf-WeYfCda274,5282
mdprep/qm/__init__.py,sha256=Q6hS_uPA2LsQRrnr1NDpAmK03iC82JzVRP-hpJWJsNo,27
mdprep/qm/point_charges.py,sha256=kJjyFZ4zI-xgRyDrabvnDRvMQUS4QjdKqNEo-RF-o6s,9010
mdprep/qm/pyscf_esp.py,sha256=DiJkgBQav4X5ceV7I5vdQIrGgQ4P-bf5p9OoV2eb-Y8,2936
mdprep/qm/pyscf_runner.py,sha256=Y5fATm9OMZV-4YADL9SrFNvy1qqP0qRSp2wjdh5BB9E,23192
mdprep/qm/xtb_esp.py,sha256=LULSSlATk5SnnIEx_uvVXD7F2TNMfjPkd9QmUBsEkO0,14616
mdprep/refinement/__init__.py,sha256=x_BFoDFNzvI1CPaq5SC5FMPpSUC_0Vt0MgIq4wcLV0c,210
mdprep/refinement/ash.py,sha256=2-UzOx2HAJilNNM51wSUmnltxRyVysziJc_ADtr5aGI,21916
mdprep/refinement/coordinates.py,sha256=6irWMmB1ddLyaCb4qDxap8JCUml-Tjzk9p11VyS_kQU,7939
mdprep/refinement/mapping.py,sha256=5pkSBYYbVJ8cp9JqwtTPWnjQG1Z3qdKORUOLoM3jlHU,6080
mdprep/refinement/openmm_minimizer.py,sha256=0-yGoRomnYOA82tbwlKSUUruKBuitc-PfOWMMYPTdXk,12677
mdprep/refinement/report.py,sha256=INzsVxoiLKJ875TcNzq1gyPIFEDdYo4hzqek7QMdHTk,4617
mdprep/refinement/selection.py,sha256=3sdfMb-KVgjd2xkOZZF8PB1H-OkpCHxzuTokFIzBvNI,20417
mdprep/refinement/workflow.py,sha256=KU2-xnvOviiWIOFU1TZPGzZtVc9PnjxVjMjsKS8BxpE,8845
mdprep/reports/__init__.py,sha256=w91ptuL6SzaywtH0VzEzUBitC0jIsEr3lSe6aoXd4vU,167
mdprep/reports/structure_report.py,sha256=qY_HOlyEtfLtkScqIkTQZ0WHXhoQJOqRtYgCrwB_wSw,3491
mdprep/structure/__init__.py,sha256=A_yKx-ixlCy01w7eAOZk6FExwr0vRAr-DTTv9LhkQbw,351
mdprep/structure/classify.py,sha256=4luvuXekFL5zqe_yYahr8iB-no2cdU5FpU6_u-vjzS8,9671
mdprep/structure/closest_xray.py,sha256=2-aURdw4T7Avbp-2ClnvWZzuAyzGpjOQXXj_exOn5mI,10727
mdprep/structure/completeness.py,sha256=2EgQiKYWjlxP1Godspx9ULpvWFldK0s3I-iIAlkybNc,5858
mdprep/structure/coordination.py,sha256=Mx_t6Nd9UoUCzrPWYLRSkxMTN7Jn9JfwfJrpielEAEM,2691
mdprep/structure/disulfides.py,sha256=IGlpAClelrzLFvL3_UtUShmaKSdyikHLP3hnD6ewEKk,1539
mdprep/structure/inspect.py,sha256=SMujV6j-1paPcn2vQAZGSCtdK3p8dE3PNzfAUgRDfjY,5022
mdprep/structure/mmcif.py,sha256=RuzUajygVvp6ymfBpQHouQbQ9_iXDgSuXGuhFYey_V8,9608
mdprep/structure/models.py,sha256=Os4-jOoC4MnWmlc0S04lvDtg_X79kPtlbF3MQFdY2EA,3985
mdprep/structure/normalize.py,sha256=cim8qXmebssHBU0MLDGmBDAmncBemao9S84wZPbHda0,23088
mdprep/structure/oligomer.py,sha256=5WHolUfGvlnxLi0Z1K0j_6PyHRpS2rZ3TCACbTJK_FA,28486
mdprep/structure/pdb.py,sha256=19iEifpq88fq5pWkR4i6b5uxknMqetomzCJ7gyHjdx4,23434
mdprep/structure/pdb_fields.py,sha256=qD-naMA-L789V-PlYqP7usTZnoAwrwSS5DrpH2-zIkY,14307
mdprep/structure/reader.py,sha256=PdUVWh5LkYKYQPSomjG9f-T1RH_TQgwjQxSiyt7-vJc,1561
mdprep/structure/rename.py,sha256=vzzkdCetDLAMenv7PHHIIbzQaQDh2eil3Sbr2hdgc7Q,3858
mdprep/structure/repair.py,sha256=CbY1ReKHMGpe4Hovs0JW-_XDzOx0Ki6tM-mZytBrIYU,27174
mdprep/structure/selectors.py,sha256=URjI0liedLqrEoh3aYcZsL9EQfzgav_IiX9EdU-19i8,7986
mdprep/structure/waters.py,sha256=zjCwNXItA1CaZ2BbcbGsHzE4Z3nbwvOZzRtW55-jmfY,35374
mdprep/structure/writer.py,sha256=sHgCqpRyE-zI3ucStUPVm4UEHqJ6jeGVbeGK0SSHus4,11229
mdprep/validation/__init__.py,sha256=yjJhITuigb6aUxakVjoxSfwDD_2Ah059nNLos7O9DoI,42
mdprep/validation/openmm_check.py,sha256=2p3iATKpdUq5VLx-lF1nogBlueAQAlS2ldxvLIc-IFA,3338
mdprep/validation/parmed_check.py,sha256=vvyveiTpziV_Xdw55_wipvAlsP1j_XQHWqr0kT3ppXA,1384
mdprep/validation/topology.py,sha256=3rK1Lz9Icl_ik7lCqDuhUTOqPkGFT6U5VEoguMnBjMw,11665
mdprep/workflows/__init__.py,sha256=HuHuTGSCYC_VU7Z1a8wq9DK7VQmqMAdPwMJK07FNF4Y,91
mdprep/workflows/doctor.py,sha256=AlQf7-zf_ckFkbSfEQA8tFiYRbpVmqC8ZyoDYysiLmk,10949
mdprep/workflows/init.py,sha256=mJwaYU7eqomlP3z_LlsGlXUi1DoXXX2_ze42n3L_8J8,8748
mdprep/workflows/inspect.py,sha256=ZdtxqkZCYrDugvgltmTvDet70lhq7QOCF-NTqb-6JbA,575
mdprep/workflows/prepare.py,sha256=39ghIX4c9SP3BCqQUX0qdeLV8phh7o7JvsuAfA0VWa8,34387
mdprep/workflows/runtime.py,sha256=padKogdQn-51lOMD-X8A-sOloaVdrh906JxARuktRy0,15833
mdprep/workflows/selftest.py,sha256=B4d527b_zIfMxAIVZZVlZGAYbop9-hfToW22qtQYdw8,7517
mdprep/workflows/validate.py,sha256=ug-3xySmGkB1iv-GOR6OOvNu8KD4aNlmCsGELpjQ5-E,974
mdprep/workflows/wizard.py,sha256=V4Q744bFp46KkfWQ-v-N1zv-1VczW0BdqjflQ-2zRjs,8582
mdprep-0.4.0.dist-info/METADATA,sha256=-98k0DeeauGPY6dGJbhOpRMvlCwnHz2FaAwGHE7iArQ,12278
mdprep-0.4.0.dist-info/WHEEL,sha256=W3fkpkm7-wf9vBI5Z-7s0eWkeM-spu78I8Neb98DeEg,87
mdprep-0.4.0.dist-info/entry_points.txt,sha256=Ht5zL5TCWAvC9VBPeVeKws5pD0-Ajx8TM08rJSWJl3A,42
mdprep-0.4.0.dist-info/licenses/LICENSE,sha256=X3UjXiT5AmegEGyA-AeYktV8_ZtheJktrGGcwwa1CgE,1076
mdprep-0.4.0.dist-info/RECORD,,
