numpy
magicgui
qtpy
scikit-image
spatialdata<=0.2.5.post0
imagecodecs
napari[all]>=0.4.19.post1
napari_matplotlib<2.0.2
napari_spatialdata<=0.5.3
dask<2024.12.1
qtpy
matplotlib
PyComplexHeatmap
scikit-learn
cellpose>=3.0.10
scanpy>=1.10.0
phenograph
squidpy
kneed
xarray<=2024.7.0
ome-types
forestplot
scikit-survival
spatialdata-plot<=0.2.7

[docs]
ipykernel
ipython
myst-nb>=1.1
myst-parser
sphinx>=4
sphinx-autodoc-typehints
sphinx-book-theme>=1
sphinx-copybutton
sphinx-qt-documentation
sphinxcontrib-bibtex>=1
sphinx-tabs
sphinxext-opengraph

[gpu]
dask-cudf-cu12==24.10.*
rapids-singlecell[rapids12]

[testing]
tox
pytest
pytest-lazy-fixtures
pytest-cov
pytest-qt
napari
qtpy
