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ClassHierarchy.graffle
README-developers.md
README.md
pyproject.toml
assets/image-20190629120540243.png
cziDoc/README.md
cziDoc/CZI-Doc/DS_ZISRAW-FileFormat.pdf
cziDoc/CZI-Doc/XmlSchemas/CommonTypes.xsd
cziDoc/CZI-Doc/XmlSchemas/Dimensions.xsd
cziDoc/CZI-Doc/XmlSchemas/DisplaySetting.xsd
cziDoc/CZI-Doc/XmlSchemas/ImageAnalysisSetting.xsd
cziDoc/CZI-Doc/XmlSchemas/ImageMetadata.xsd
cziDoc/CZI-Doc/XmlSchemas/Information.xsd
cziDoc/CZI-Doc/XmlSchemas/Instrument.xsd
cziDoc/CZI-Doc/XmlSchemas/Layers.xsd
cziDoc/CZI-Doc/XmlSchemas/PhysiologySetting.xsd
cziDoc/CZI-Doc/XmlSchemas/Scaling.xsd
cziDoc/CZI-Doc/XmlSchemas/Timeline.xsd
cziDoc/CZI-Doc/XmlSchemas/Views.xsd
cziDoc/SimpleImageViewer/App.xaml
cziDoc/SimpleImageViewer/App.xaml.cs
cziDoc/SimpleImageViewer/MainWindow.xaml
cziDoc/SimpleImageViewer/MainWindow.xaml.cs
cziDoc/SimpleImageViewer/SimpleImageViewer.csproj
cziDoc/SimpleImageViewer/SimpleImageViewer.sln
cziDoc/SimpleImageViewer/app.config
cziDoc/SimpleImageViewer/Properties/AssemblyInfo.cs
cziDoc/SimpleImageViewer/Properties/Resources.Designer.cs
cziDoc/SimpleImageViewer/Properties/Resources.resx
cziDoc/SimpleImageViewer/Properties/Settings.Designer.cs
cziDoc/SimpleImageViewer/Properties/Settings.settings
cziDoc/SimpleImageViewer/bin/Release/WBa.SimpleImageViewer.exe
cziDoc/SimpleImageViewer/bin/Release/ZeissImageLib.dll
cziDoc/ZeissImageLib/ZeissImageLib.dll
cziDoc/ZeissImageLib/ZeissImageLib.pdf
dcclab/DCCExceptions.py
dcclab/__init__.py
dcclab/_version.py
dcclab.egg-info/PKG-INFO
dcclab.egg-info/SOURCES.txt
dcclab.egg-info/dependency_links.txt
dcclab.egg-info/requires.txt
dcclab.egg-info/top_level.txt
dcclab/analysis/__init__.py
dcclab/analysis/computeengine.py
dcclab/analysis/labpca.py
dcclab/database/Data-Utilisation.csv
dcclab/database/Data-souris.csv
dcclab/database/__init__.py
dcclab/database/cervoDatabase.py
dcclab/database/database.py
dcclab/database/databaseUtilities.py
dcclab/database/labdatadb.py
dcclab/database/pomDatabase.py
dcclab/image/__init__.py
dcclab/image/channel.py
dcclab/image/channelFloat.py
dcclab/image/channelInteger.py
dcclab/image/cziUtil.py
dcclab/image/image.py
dcclab/image/imageCollection.py
dcclab/image/imageFile.py
dcclab/image/lifFile.py
dcclab/image/lifReader.py
dcclab/image/loader.py
dcclab/image/movieFile.py
dcclab/image/tiff2AVI.py
dcclab/image/timeSeries.py
dcclab/image/zStack.py
dcclab/metadata/__init__.py
dcclab/metadata/metadata.py
dcclab/metadata/cziMetadata/__init__.py
dcclab/metadata/cziMetadata/cziChannel.py
dcclab/metadata/cziMetadata/cziFile.py
dcclab/metadata/cziMetadata/cziFilter.py
dcclab/metadata/cziMetadata/cziMetadata.py
dcclab/metadata/dtfMetadata/__init__.py
dcclab/metadata/dtfMetadata/dtfMetadata.py
dcclab/metadata/sciMetadata/__init__.py
dcclab/metadata/sciMetadata/sciMetadata.py
dcclab/metadata/txtMetadata/__init__.py
dcclab/metadata/txtMetadata/pdkTXTMetadata.py
dcclab/metadata/txtMetadata/txtMetadata.py
dcclab/metadata/xlsxMetadata/__init__.py
dcclab/metadata/xlsxMetadata/pdkXLSXMetadata.py
dcclab/metadata/xlsxMetadata/xlsxMetadata.py
dcclab/ml/__init__.py
dcclab/ml/dataset.py
dcclab/tests/DCCImageTests.py
dcclab/tests/__init__.py
dcclab/tests/context.py
dcclab/tests/correlationMatrixTest.py
dcclab/tests/cziUtilTests.py
dcclab/tests/env.py
dcclab/tests/testBaseTestClass.py
dcclab/tests/testCZIFile.py
dcclab/tests/testChannelFloat.py
dcclab/tests/testChannelInteger.py
dcclab/tests/testChannels.py
dcclab/tests/testComputeEngine.py
dcclab/tests/testCziChannel.py
dcclab/tests/testCziFilter.py
dcclab/tests/testCziMetadata.py
dcclab/tests/testDTFMetadata.py
dcclab/tests/testDataGraphs.py
dcclab/tests/testDatabase.py
dcclab/tests/testDatabaseUtilities.py
dcclab/tests/testImageCollection.py
dcclab/tests/testImageMap.py
dcclab/tests/testLabdata.py
dcclab/tests/testLifFile.py
dcclab/tests/testMATLABFile.py
dcclab/tests/testMLDatasets.py
dcclab/tests/testMetadata.py
dcclab/tests/testMovieFile.py
dcclab/tests/testPDKTXTMetadata.py
dcclab/tests/testPDKXLSXMetadata.py
dcclab/tests/testPathPatterns.py
dcclab/tests/testSciMetadata.py
dcclab/tests/testScipy.py
dcclab/tests/testTimeSeries.py
dcclab/tests/testXlsxMetadata.py
dcclab/tests/testZStack.py
dcclab/tests/test_meta.xml
dcclab/tests/testData/2dArray.mat
dcclab/tests/testData/MissingEntries.xml
dcclab/tests/testData/MissingKeys.xml
dcclab/tests/testData/nothing.mat
dcclab/tests/testData/query_DAPI.csv
dcclab/tests/testData/query_DAPI_results.csv
dcclab/tests/testData/query_egfp.csv
dcclab/tests/testData/query_egfp_results.csv
dcclab/tests/testData/query_mcher.csv
dcclab/tests/testData/query_mcher_results.csv
dcclab/tests/testData/temp_full.xml
dcclab/tests/testData/test-001.jpg
dcclab/tests/testData/test-002.jpg
dcclab/tests/testData/test-003.jpg
dcclab/tests/testData/test.bmp
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dcclab/tests/testData/test2.png
dcclab/tests/testData/testCSVMetadata.csv
dcclab/tests/testData/testCSVReader.csv
dcclab/tests/testData/testCSVReaderOtherSep.csv
dcclab/tests/testData/testCziBSCZY0Tiny.czi
dcclab/tests/testData/testCziFile.czi
dcclab/tests/testData/testCziFileTwoScenesTiny.czi
dcclab/tests/testData/testCziScenes_ZStack.czi
dcclab/tests/testData/testCziTSeries_Scenes.czi
dcclab/tests/testData/testCziTSeries_ZStack.czi
dcclab/tests/testData/testCziYX0Tiny.czi
dcclab/tests/testData/testCziZStack4.czi
dcclab/tests/testData/testCziZStack4Tiny.czi
dcclab/tests/testData/testCziZStack4TinyOneChannel.czi
dcclab/tests/testData/testMovie.ini
dcclab/tests/testData/testMovie.mov
dcclab/tests/testData/testMovie.raw
dcclab/tests/testData/testOneChannel2Scenes.czi
dcclab/tests/testData/testTinyCzi.czi
dcclab/tests/testData/test_NotLifFile.lif
dcclab/tests/testData/test_meta.xml
dcclab/tests/testData/wrongFile.txt
dcclab/tests/testData/dataset/E2/cluster (1).png
dcclab/tests/testData/dataset/E2/cluster (2).png
dcclab/tests/testData/dataset/E2/cluster (3).png
dcclab/tests/testData/dataset/E2/cluster (4).png
dcclab/tests/testData/dataset/E2/cluster (5).png
dcclab/tests/testData/dataset/E2/cluster (6).png
dcclab/tests/testData/dataset/O-103/O-103-01_C001L103.png
dcclab/tests/testData/dataset/O-103/O-103-02_C001L103.png
dcclab/tests/testData/dataset/O-103/O-103-03_C001L103.png
dcclab/tests/testData/dataset/O-103/O-103-04_C001L103.png
dcclab/tests/testData/dataset/O-103/cluster (1).png
dcclab/tests/testData/dataset/O-103/cluster (2).png
dcclab/tests/testData/dataset/O-103/cluster (3).png
dcclab/tests/testData/dataset/O-103/cluster (4).png
dcclab/tests/testData/dataset/O-103/cluster (5).png
dcclab/tests/testData/dataset/O-103/cluster (6).png
dcclab/tests/testData/dataset/nostoc/Nostoc01_C001L103.png
dcclab/tests/testData/dataset/nostoc/Nostoc02_C001L103.png
dcclab/tests/testData/dataset/nostoc/Nostoc03_C001L103.png
dcclab/tests/testData/dataset/nostoc/Nostoc04_C001L103.png
dcclab/tests/testData/dataset/nostoc/Nostoc05_C001L103.png
dcclab/tests/testData/dataset/nostoc/Nostoc_C001L103.png
dcclab/tests/testData/images/ADJCORR20220621-Polystyrene6umbeads-tileTest-zoom2-001-Bliq VMS-Ch-2-Ch 2-VOI_2-Slice_001-X001-Y001-Z001-(X15990.31-Y5215.50-Z4193.00)-Time_29.127s-Frame_005100-Projection_Average.tif
dcclab/tests/testData/images/ADJCORR20220621-Polystyrene6umbeads-tileTest-zoom2-001-Bliq VMS-Ch-2-Ch 2-VOI_2-Slice_002-X001-Y002-Z001-(X15990.31-Y5240.74-Z4193.00)-Time_30.279s-Frame_005136-Projection_Average.tif
dcclab/tests/testData/images/ADJCORR20220621-Polystyrene6umbeads-tileTest-zoom2-001-Bliq VMS-Ch-2-Ch 2-VOI_2-Slice_007-X002-Y001-Z001-(X16040.80-Y5215.50-Z4193.00)-Time_36.198s-Frame_005321-Projection_Average.tif
dcclab/tests/testData/images/ADJCORR20220621-Polystyrene6umbeads-tileTest-zoom2-001-Bliq VMS-Ch-2-Ch 2-VOI_2-Slice_008-X002-Y002-Z001-(X16040.80-Y5240.74-Z4193.00)-Time_37.382s-Frame_005358-Projection_Average.tif
dcclab/tests/testData/images/ADJCORR20220621-Polystyrene6umbeads-tileTest-zoom2-001-Bliq VMS-Ch-2-Ch 2-VOI_2-Slice_013-X003-Y001-Z001-(X16091.29-Y5215.50-Z4193.00)-Time_43.302s-Frame_005543-Projection_Average.tif
dcclab/tests/testData/images/ADJCORR20220621-Polystyrene6umbeads-tileTest-zoom2-001-Bliq VMS-Ch-2-Ch 2-VOI_2-Slice_014-X003-Y002-Z001-(X16091.29-Y5240.74-Z4193.00)-Time_44.454s-Frame_005579-Projection_Average.tif
dcclab/tests/testData/labelledDataset/E2/cluster (1).png
dcclab/tests/testData/labelledDataset/E2/cluster (2).png
dcclab/tests/testData/labelledDataset/E2/cluster (3).png
dcclab/tests/testData/labelledDataset/E2/cluster (4).png
dcclab/tests/testData/labelledDataset/E2/cluster (5).png
dcclab/tests/testData/labelledDataset/E2/cluster (6).png
dcclab/tests/testData/labelledDataset/E2_label/cluster (1).png
dcclab/tests/testData/labelledDataset/E2_label/cluster (2).png
dcclab/tests/testData/labelledDataset/E2_label/cluster (3).png
dcclab/tests/testData/labelledDataset/E2_label/cluster (4).png
dcclab/tests/testData/labelledDataset/E2_label/cluster (5).png
dcclab/tests/testData/labelledDataset/E2_label/cluster (6).png
dcclab/tests/testData/labelledDataset/O-103/O-103-01_C001L103.png
dcclab/tests/testData/labelledDataset/O-103/O-103-02_C001L103.png
dcclab/tests/testData/labelledDataset/O-103/O-103-03_C001L103.png
dcclab/tests/testData/labelledDataset/O-103/O-103-04_C001L103.png
dcclab/tests/testData/labelledDataset/O-103/cluster (1).png
dcclab/tests/testData/labelledDataset/O-103/cluster (2).png
dcclab/tests/testData/labelledDataset/O-103/cluster (3).png
dcclab/tests/testData/labelledDataset/O-103/cluster (4).png
dcclab/tests/testData/labelledDataset/O-103/cluster (5).png
dcclab/tests/testData/labelledDataset/O-103/cluster (6).png
dcclab/tests/testData/labelledDataset/O-103_label/O-103-01_C001L103.png
dcclab/tests/testData/labelledDataset/O-103_label/O-103-02_C001L103.png
dcclab/tests/testData/labelledDataset/O-103_label/O-103-03_C001L103.png
dcclab/tests/testData/labelledDataset/O-103_label/O-103-04_C001L103.png
dcclab/tests/testData/labelledDataset/O-103_label/cluster (1).png
dcclab/tests/testData/labelledDataset/O-103_label/cluster (2).png
dcclab/tests/testData/labelledDataset/O-103_label/cluster (3).png
dcclab/tests/testData/labelledDataset/O-103_label/cluster (4).png
dcclab/tests/testData/labelledDataset/O-103_label/cluster (5).png
dcclab/tests/testData/labelledDataset/O-103_label/cluster (6).png
dcclab/tests/testData/labelledDataset/nostoc/Nostoc01_C001L103.png
dcclab/tests/testData/labelledDataset/nostoc/Nostoc02_C001L103.png
dcclab/tests/testData/labelledDataset/nostoc/Nostoc03_C001L103.png
dcclab/tests/testData/labelledDataset/nostoc/Nostoc04_C001L103.png
dcclab/tests/testData/labelledDataset/nostoc/Nostoc05_C001L103.png
dcclab/tests/testData/labelledDataset/nostoc/Nostoc_C001L103.png
dcclab/tests/testData/labelledDataset/nostoc_label/Nostoc01_C001L103.png
dcclab/tests/testData/labelledDataset/nostoc_label/Nostoc02_C001L103.png
dcclab/tests/testData/labelledDataset/nostoc_label/Nostoc03_C001L103.png
dcclab/tests/testData/labelledDataset/nostoc_label/Nostoc04_C001L103.png
dcclab/tests/testData/labelledDataset/nostoc_label/Nostoc05_C001L103.png
dcclab/tests/testData/labelledDataset/nostoc_label/Nostoc_C001L103.png
dcclab/utils/__init__.py
dcclab/utils/cafeine.py
dcclab/utils/pathPattern.py