Metadata-Version: 2.4
Name: acellera-pdb2pqr
Version: 3.7.1.post1
Summary: Automates many of the common tasks of preparing structures for continuum solvation calculations as well as many other types of biomolecular structure modeling, analysis, and simulation.
Project-URL: Homepage, https://www.poissonboltzmann.org
Project-URL: Documentation, https://pdb2pqr.readthedocs.io/
Project-URL: Get help, https://github.com/Electrostatics/pdb2pqr/issues
Project-URL: Publications, https://pubmed.ncbi.nlm.nih.gov/?term=R01+GM069702
Project-URL: Funding, https://bit.ly/apbs-funding
Project-URL: Source, https://github.com/Electrostatics/pdb2pqr
Author: Jens Erik Nielsen
Author-email: Nathan Baker <nathanandrewbaker@gmail.com>
License: Copyright (c) 2002-2024, Jens Erik Nielsen; Nathan A. Baker; Battelle Memorial Institute, Developed at the Pacific Northwest National Laboratory, operated by Battelle Memorial Institute, Pacific Northwest Division for the U.S. Department Energy.; Paul Czodrowski & Gerhard Klebe, University of Marburg.
        
        All rights reserved.
        
        Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met:
        
        * Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer.
        
        * Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution.
        
        * Neither the names of University College Dublin, Battelle Memorial Institute, Pacific Northwest National Laboratory, US Department of Energy, or University of Marburg nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission.
        
        THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
License-File: COPYING
License-File: LICENSE.md
Keywords: chemistry,molecular biology,science
Classifier: Development Status :: 4 - Beta
Classifier: Environment :: Console
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: BSD License
Classifier: Natural Language :: English
Classifier: Operating System :: MacOS
Classifier: Operating System :: Microsoft :: Windows
Classifier: Operating System :: POSIX
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Classifier: Programming Language :: Python :: 3.13
Classifier: Programming Language :: Python :: Implementation :: CPython
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Chemistry
Requires-Python: <4,>=3.10
Requires-Dist: mmcif-pdbx>=1.1.2
Requires-Dist: numpy
Requires-Dist: propka>=3.5
Requires-Dist: requests
Requires-Dist: typing-extensions
Provides-Extra: dev
Requires-Dist: check-manifest; extra == 'dev'
Provides-Extra: pkaani
Requires-Dist: ase; extra == 'pkaani'
Requires-Dist: joblib; extra == 'pkaani'
Requires-Dist: pkaani; extra == 'pkaani'
Requires-Dist: scikit-learn>=1.6.1; extra == 'pkaani'
Requires-Dist: scipy; extra == 'pkaani'
Requires-Dist: setuptools<=81; extra == 'pkaani'
Requires-Dist: tabulate; extra == 'pkaani'
Requires-Dist: torch; extra == 'pkaani'
Requires-Dist: torchani<=2.2.4; extra == 'pkaani'
Provides-Extra: test
Requires-Dist: coverage; extra == 'test'
Requires-Dist: pandas>=1.0; extra == 'test'
Requires-Dist: pytest; extra == 'test'
Requires-Dist: ruff; extra == 'test'
Requires-Dist: sphinx; extra == 'test'
Requires-Dist: sphinx-rtd-theme; extra == 'test'
Requires-Dist: testfixtures; extra == 'test'
Description-Content-Type: text/markdown

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PDB2PQR
============

This package contains the PDB2PQR software.  For more information, please see

* Home page:  http://www.poissonboltzmann.org/
* Documentation: http://pdb2pqr.readthedocs.io

