morphomapping.MM.umap

Contents

morphomapping.MM.umap#

MM.umap(nn, mdist, met)#

Run umap with self.df. Adds x and y values to self.df as extra columns.

Parameters:
  • nn (int) – nearest neighbours for umap settings

  • mdist (float) – minimum distance for umap settings

  • met (str) – metric for umap settings

Return type:

None