accessible-pygments==0.0.5
aiohappyeyeballs==2.6.1
aiohttp==3.12.15
aiosignal==1.4.0
alabaster==1.0.0
anndata==0.12.2
anyio==4.10.0
argcomplete==3.6.2
argon2-cffi==25.1.0
argon2-cffi-bindings==25.1.0
array-api-compat==1.12.0
arrow==1.3.0
astroid==3.3.11
asttokens==3.0.0
async-lru==2.0.5
attrs==25.3.0
babel==2.17.0
beautifulsoup4==4.13.5
black==25.1.0
bleach==6.2.0
-e file:///home/ariadna/github/cellstate-pred
certifi==2025.8.3
cffi==2.0.0
charset-normalizer==3.4.3
click==8.2.1
cloudpickle==3.1.1
colorama==0.4.6
colorlog==6.9.0
comm==0.2.3
contourpy==1.3.3
coverage==7.10.6
crc32c==2.7.1
cycler==0.12.1
datasets==4.1.1
debugpy==1.8.16
decorator==5.2.1
defusedxml==0.7.1
dependency-groups==1.3.1
dill==0.4.0
distlib==0.4.0
docopt==0.6.2
docutils==0.21.2
donfig==0.8.1.post1
executing==2.2.1
fa2-modified==0.3.10
fastcluster==1.2.6
fastjsonschema==2.21.2
filelock==3.19.1
fonttools==4.59.2
fqdn==1.5.1
frozenlist==1.7.0
fsspec==2025.9.0
git-lint==0.1.2
greenlet==3.2.4
h11==0.16.0
h5py==3.14.0
hf-xet==1.1.10
html-linter==0.4.0
httpcore==1.0.9
httpx==0.28.1
huggingface-hub==0.35.0
idna==3.10
igraph==0.11.9
imagecodecs==2025.8.2
imageio==2.37.0
imagesize==1.4.1
importlib-metadata==8.7.0
iniconfig==2.1.0
ipykernel==6.30.1
ipython==9.5.0
ipython-pygments-lexers==1.1.1
isoduration==20.11.0
isort==6.0.1
jedi==0.19.2
jinja2==3.1.6
joblib==1.5.2
json5==0.12.1
jsonpointer==3.0.0
jsonschema==4.25.1
jsonschema-specifications==2025.9.1
jupyter-cache==1.0.1
jupyter-client==8.6.3
jupyter-core==5.8.1
jupyter-events==0.12.0
jupyter-lsp==2.3.0
jupyter-server==2.17.0
jupyter-server-terminals==0.5.3
jupyterlab==4.4.7
jupyterlab-pygments==0.3.0
jupyterlab-server==2.27.3
kiwisolver==1.4.9
lark==1.2.2
lazy-loader==0.4
legacy-api-wrap==1.4.1
leidenalg==0.10.2
littleutils==0.2.4
llvmlite==0.44.0
markdown-it-py==3.0.0
markupsafe==3.0.2
matplotlib==3.10.6
matplotlib-inline==0.1.7
mccabe==0.7.0
mdit-py-plugins==0.5.0
mdurl==0.1.2
mistune==3.1.4
mpmath==1.3.0
multidict==6.6.4
multiprocess==0.70.16
mypy==1.18.1
mypy-extensions==1.1.0
myst-nb==1.3.0
myst-parser==4.0.1
natsort==8.4.0
nbclient==0.10.2
nbconvert==7.16.6
nbformat==5.10.4
nest-asyncio==1.6.0
networkx==3.5
notebook-shim==0.2.4
nox==2025.5.1
numba==0.61.2
numcodecs==0.16.2
numpy==1.26.4
nvidia-cublas-cu12==12.8.4.1
nvidia-cuda-cupti-cu12==12.8.90
nvidia-cuda-nvrtc-cu12==12.8.93
nvidia-cuda-runtime-cu12==12.8.90
nvidia-cudnn-cu12==9.10.2.21
nvidia-cufft-cu12==11.3.3.83
nvidia-cufile-cu12==1.13.1.3
nvidia-curand-cu12==10.3.9.90
nvidia-cusolver-cu12==11.7.3.90
nvidia-cusparse-cu12==12.5.8.93
nvidia-cusparselt-cu12==0.7.1
nvidia-nccl-cu12==2.27.3
nvidia-nvjitlink-cu12==12.8.93
nvidia-nvtx-cu12==12.8.90
outdated==0.2.2
packaging==25.0
pandas==2.3.2
pandas-flavor==0.7.0
pandocfilters==1.5.1
parmap==1.7.0
parso==0.8.5
pathlib2==2.3.7.post1
pathspec==0.12.1
patsy==1.0.1
pexpect==4.9.0
pillow==11.3.0
pingouin==0.5.5
platformdirs==4.4.0
pluggy==1.6.0
pooch==1.8.2
prometheus-client==0.22.1
prompt-toolkit==3.0.52
propcache==0.3.2
psutil==6.1.1
ptyprocess==0.7.0
pure-eval==0.2.3
pyarrow==21.0.0
pycparser==2.23
pydata-sphinx-theme==0.16.1
pygments==2.19.2
pylint==3.3.8
pymde==0.1.18
pynndescent==0.5.13
pyparsing==3.2.4
pytest==8.4.2
pytest-cov==7.0.0
pytest-mock==3.15.1
python-dateutil==2.9.0.post0
python-json-logger==3.3.0
pytz==2025.2
pyyaml==6.0.2
pyzmq==27.1.0
referencing==0.36.2
regex==2025.9.18
requests==2.32.5
rfc3339-validator==0.1.4
rfc3986-validator==0.1.1
rfc3987-syntax==1.1.0
rich==14.1.0
roman-numerals-py==3.1.0
rpds-py==0.27.1
ruff==0.13.1
safetensors==0.6.2
scanpy==1.11.4
scikit-image==0.25.2
scikit-learn==1.7.2
scipy==1.16.2
seaborn==0.13.2
seaborn-extensions==0.2.1
send2trash==1.8.3
session-info2==0.2.2
setuptools==80.9.0
six==1.17.0
sniffio==1.3.1
snowballstemmer==3.0.1
soupsieve==2.8
sphinx==8.2.3
sphinx-autodoc-typehints==3.2.0
sphinx-copybutton==0.5.2
sphinx-rtd-theme==3.0.2
sphinxcontrib-applehelp==2.0.0
sphinxcontrib-devhelp==2.0.0
sphinxcontrib-htmlhelp==2.1.0
sphinxcontrib-jquery==4.1
sphinxcontrib-jsmath==1.0.1
sphinxcontrib-qthelp==2.0.0
sphinxcontrib-serializinghtml==2.0.0
sqlalchemy==2.0.43
stack-data==0.6.3
statsmodels==0.14.5
sympy==1.14.0
tabulate==0.9.0
taskipy==1.14.1
template-remover==0.1.9
termcolor==3.1.0
terminado==0.18.1
texttable==1.7.0
threadpoolctl==3.6.0
tifffile==2025.9.9
tinycss2==1.4.0
tokenizers==0.22.1
tomli==2.2.1
tomlkit==0.13.3
torch==2.8.0
torchvision==0.23.0
tornado==6.5.2
tqdm==4.67.1
traitlets==5.14.3
transformers==4.56.2
triton==3.4.0
types-python-dateutil==2.9.0.20250822
typing-extensions==4.15.0
tzdata==2025.2
umap-learn==0.5.9.post2
uri-template==1.3.0
urllib3==2.5.0
virtualenv==20.34.0
wcwidth==0.2.13
webcolors==24.11.1
webencodings==0.5.1
websocket-client==1.8.0
xarray==2025.9.0
xxhash==3.5.0
yarl==1.20.1
zarr==3.1.2
zipp==3.23.0
