Coverage for ParTIpy/__init__.py: 100%

1from .arch import AA 

2from .enrichment import ( 

3 calculate_weights, 

4 extract_top_processes, 

5 extract_top_specific_processes, 

6 meta_enrichment, 

7 weighted_expr, 

8) 

9from .paretoti_funcs import ( 

10 align_archetypes, 

11 bootstrap_aa, 

12 plot_2D, 

13 plot_3D, 

14 plot_bootstrap_aa, 

15 plot_projected_dist, 

16 plot_var_explained_aa, 

17 plot_var_on_top, 

18 reduce_pca, 

19 var_explained_aa, 

20) 

21 

22# what is exposed when running 'from ParTIpy import *' 

23__all__ = [ 

24 "calculate_weights", 

25 "weighted_expr", 

26 "extract_top_processes", 

27 "extract_top_specific_processes", 

28 "meta_enrichment", 

29 "reduce_pca", 

30 "var_explained_aa", 

31 "plot_var_explained_aa", 

32 "plot_projected_dist", 

33 "plot_var_on_top", 

34 "bootstrap_aa", 

35 "plot_bootstrap_aa", 

36 "plot_2D", 

37 "plot_3D", 

38 "align_archetypes", 

39 "AA", 

40]