README.md
pyproject.toml
src/graphpop_cli/__init__.py
src/graphpop_cli/cli.py
src/graphpop_cli/config.py
src/graphpop_cli/connection.py
src/graphpop_cli/formatters.py
src/graphpop_cli/validators.py
src/graphpop_cli.egg-info/PKG-INFO
src/graphpop_cli.egg-info/SOURCES.txt
src/graphpop_cli.egg-info/dependency_links.txt
src/graphpop_cli.egg-info/entry_points.txt
src/graphpop_cli.egg-info/requires.txt
src/graphpop_cli.egg-info/top_level.txt
src/graphpop_cli/commands/__init__.py
src/graphpop_cli/commands/aggregate.py
src/graphpop_cli/commands/batch.py
src/graphpop_cli/commands/compare.py
src/graphpop_cli/commands/config_cmd.py
src/graphpop_cli/commands/converge.py
src/graphpop_cli/commands/db.py
src/graphpop_cli/commands/divergence.py
src/graphpop_cli/commands/diversity.py
src/graphpop_cli/commands/doctor.py
src/graphpop_cli/commands/dump.py
src/graphpop_cli/commands/export_bed.py
src/graphpop_cli/commands/export_windows.py
src/graphpop_cli/commands/extract.py
src/graphpop_cli/commands/filter_results.py
src/graphpop_cli/commands/garud_h.py
src/graphpop_cli/commands/genome_scan.py
src/graphpop_cli/commands/ihs.py
src/graphpop_cli/commands/import_data.py
src/graphpop_cli/commands/inventory.py
src/graphpop_cli/commands/joint_sfs.py
src/graphpop_cli/commands/ld.py
src/graphpop_cli/commands/lookup.py
src/graphpop_cli/commands/neighbors.py
src/graphpop_cli/commands/nsl.py
src/graphpop_cli/commands/plot.py
src/graphpop_cli/commands/pop_summary.py
src/graphpop_cli/commands/query.py
src/graphpop_cli/commands/rank_genes.py
src/graphpop_cli/commands/report.py
src/graphpop_cli/commands/roh.py
src/graphpop_cli/commands/run_all.py
src/graphpop_cli/commands/server.py
src/graphpop_cli/commands/setup.py
src/graphpop_cli/commands/sfs.py
src/graphpop_cli/commands/validate.py
src/graphpop_cli/commands/xpehh.py
tests/test_commands.py
tests/test_config.py
tests/test_connection.py
tests/test_formatters.py