.coverage*
.snakemake
__pycache__/
*.py[cod]

# Distribution / packaging
*.egg
*.egg-info/
dist/
build/
eggs/
wheels/

# Virtual environments
.venv/
venv/
env/

# Jupyter Notebook
.ipynb_checkpoints/

# OS-specific
.DS_Store
Thumbs.db
example/sample_system/results

agentic_finalisation.odt

*.patch
patches

# Local conda/micromamba environment
.micromamba/

# MkDocs build output
site/
