Home | Trees | Indices | Help |
|
---|
|
|
|||
PhylomeDBConnector Reuturns a connector to a phylomeDB database. |
|
|||
__VERSION__ =
'phylomedb' provides an access API to the data stored in the phylogenetic database PhylomeDB *[1]. |
|||
ROOTED_PHYLOMES =
|
|||
__package__ =
|
|
__VERSION__'phylomedb' provides an access API to the data stored in the phylogenetic database PhylomeDB *[1]. All methods to perform queries are implemented within the PhylomeDBConnector class. *[1] PhylomeDB: a database for genome-wide collections of gene phylogenies Jaime Huerta-Cepas, Anibal Bueno, Joaquin Dopazo and Toni Gabaldon. PhylomeDB is a database of complete phylomes derived for different genomes within a specific taxonomic range. All phylomes in the database are built using a high-quality phylogenetic pipeline that includes evolutionary model testing and alignment trimming phases. For each genome, PhylomeDB provides the alignments, phylogentic trees and tree-based orthology predictions for every single encoded protein.
|
ROOTED_PHYLOMES
|
Home | Trees | Indices | Help |
|
---|
Generated by Epydoc 3.0.1 on Tue Jun 22 12:07:33 2010 | http://epydoc.sourceforge.net |