anndata==0.11.4
captum==0.9.0
click==8.3.3
crested==1.4.1
datasets==3.6.0
loguru==0.7.3
matplotlib==3.10.9
modisco-lite==2.3.2
pandas==3.0.2
peft==0.15.1
numpy>=2
scikit-learn==1.8.0
seaborn==0.13.2
shap==0.51.0
torch==2.11.0
transformers==5.8.0
wandb==0.26.1

[dev]
mkdocs-material==9.7.6
mkdocs<2.0,>=1.6
mkdocs-jupyter==0.25.1
mkdocstrings-python==2.0.3
mkdocstrings==1.0.3
pymdown-extensions==10.21
pytest==9.0.3
pytest-cov==7.0.0
pytest-xdist>=3.0
ruff==0.15.4
