CHANGELOG.md
CONTRIBUTING.md
LICENSE
MANIFEST.in
README.md
pyproject.toml
pytest.ini
requirements.txt
setup.py
.github/copilot-instructions.md
codesentinel/AGENT_INSTRUCTIONS.md
codesentinel/__init__.py
codesentinel/gui_launcher.py
codesentinel/gui_project_setup.py
codesentinel/gui_wizard_v2.py
codesentinel/launcher.py
codesentinel.egg-info/PKG-INFO
codesentinel.egg-info/SOURCES.txt
codesentinel.egg-info/dependency_links.txt
codesentinel.egg-info/entry_points.txt
codesentinel.egg-info/not-zip-safe
codesentinel.egg-info/requires.txt
codesentinel.egg-info/top_level.txt
codesentinel/cli/__init__.py
codesentinel/cli/__main__.py
codesentinel/cli/agent_utils.py
codesentinel/cli/alert_utils.py
codesentinel/cli/clean_utils.py
codesentinel/cli/command_utils.py
codesentinel/cli/dev_audit_remediation.py
codesentinel/cli/dev_audit_review.py
codesentinel/cli/dev_audit_utils.py
codesentinel/cli/doc_utils.py
codesentinel/cli/document_formatter_cli.py
codesentinel/cli/memory_utils.py
codesentinel/cli/root_clean_utils.py
codesentinel/cli/scan_utils.py
codesentinel/cli/test_utils.py
codesentinel/cli/update_utils.py
codesentinel/core/__init__.py
codesentinel/core/dev_audit.py
codesentinel/gui/__init__.py
codesentinel/gui/formatting_config.py
codesentinel/utils/alerts.py
codesentinel/utils/archive_decision_provider.py
codesentinel/utils/archive_enrichment_pipeline.py
codesentinel/utils/archive_index_manager.py
codesentinel/utils/archive_maintenance_scheduler.py
codesentinel/utils/archive_verification_pipeline.py
codesentinel/utils/config.py
codesentinel/utils/document_formatter.py
codesentinel/utils/file_integrity.py
codesentinel/utils/oracl_context_tier.py
codesentinel/utils/path_resolver.py
codesentinel/utils/process_monitor.py
codesentinel/utils/root_policy.py
codesentinel/utils/scheduler.py
codesentinel/utils/session_memory.py
codesentinel/utils/versioning.py
docs/ADVANCED_ANALYTICS_FRAMEWORK.md
docs/AGENT_INSTRUCTIONS.md
docs/AGENT_INTEGRATION_STATUS_SYSTEM.md
docs/AGENT_QUICK_REFERENCE.md
docs/AI_AGENT_RULES.md
docs/AUTOMATED_TASKS_AUDIT_20251107.md
docs/CLI_AGENT_INTEGRATION_ANALYSIS.md
docs/DOCUMENTATION_REVIEW_POLICY_OPTIMIZATION_20251107.md
docs/DOCUMENT_FORMATTING_AUTOMATION.md
docs/ENTERPRISE_INTEGRATION_GUIDE.md
docs/EXECUTION_SUMMARY.md
docs/FEATURE_AUDIT_DOCUMENT_CLASSIFICATION_20251107.md
docs/FEATURE_DISTRIBUTED_AGENT_INSTRUCTION_STRATEGY.md
docs/FINAL_COMPLETION_SUMMARY_20251107.md
docs/FORMATTING_IMPLEMENTATION_SUMMARY.md
docs/GOVERNANCE_T0-5_ESTABLISHMENT.md
docs/HEADER_FOOTER_GUIDE.md
docs/HEADER_FOOTER_QUICK_REFERENCE.md
docs/HELP_EXAMPLES_OPTIMIZATION.md
docs/INFRASTRUCTURE_HARDENING_REPORT.md
docs/ORACL_MEMORY_ARCHITECTURE.md
docs/ORACL_MEMORY_ECOSYSTEM_PROPOSAL.md
docs/ORPHANED_MODULES_ANALYSIS.md
docs/README.md
docs/ROOT_CLEANUP_AUTOMATION.md
docs/SCAN_CLEAN_WORKFLOW.md
docs/SEAM_PROTECTION_BRANDING.md
docs/SESSION_COMPLETION_SUMMARY.md
docs/SESSION_IMPLEMENTATION_ANALYSIS_20251107.md
docs/TOOL_MANAGEMENT_POLICY.md
docs/UNC_TESTING_GUIDE.md
docs/UPDATE_COMMAND_IMPLEMENTATION_SUMMARY.md
docs/orphaned_modules_report.md
docs/architecture/AGENT_INSTRUCTION_STRATEGY.md
docs/architecture/CROSS_PLATFORM_OUTPUT_POLICY.md
docs/architecture/DOCUMENT_CLASSIFICATION.md
docs/architecture/PACKAGING_RATIONALE.md
docs/architecture/POLICY.md
docs/architecture/PRIORITY_DISTRIBUTION_SYSTEM.md
docs/architecture/PROCESS_MONITOR.md
docs/architecture/README.md
docs/architecture/SESSION_IMPLEMENTATION_ANALYSIS_20251107.md
docs/architecture/VALIDATION_LOCKS_IMPLEMENTATION.md
docs/audit/AUDIT_A4_1_COMPLETION_REPORT.md
docs/audit/AUDIT_A4_2_COMPLETION_REPORT.md
docs/audit/AUDIT_A4_3_COMPLETION_REPORT.md
docs/audit/AUDIT_COMPLETE_SYSTEM_READY.md
docs/audit/AUDIT_PHASE_1_AND_2_FINAL_REPORT.md
docs/audit/DEV_AUDIT_INTEGRATION_SUMMARY.md
docs/audit/README.md
docs/cli/alert_help.md
docs/cli/alert_help.txt
docs/cli/clean_help.md
docs/cli/clean_help.txt
docs/cli/dev_audit_help.md
docs/cli/dev_audit_help.txt
docs/cli/integrate_help.md
docs/cli/integrate_help.txt
docs/cli/integrity_help.md
docs/cli/integrity_help.txt
docs/cli/main_help.md
docs/cli/main_help.txt
docs/cli/maintenance_help.md
docs/cli/maintenance_help.txt
docs/cli/scan_help.md
docs/cli/scan_help.txt
docs/cli/schedule_help.md
docs/cli/schedule_help.txt
docs/cli/setup_help.md
docs/cli/setup_help.txt
docs/cli/status_help.md
docs/cli/status_help.txt
docs/cli/update_help.md
docs/cli/update_help.txt
docs/development/PYTHON_COMPATIBILITY.md
docs/guides/DOCUMENTATION_AUDIT.md
docs/guides/DOCUMENTATION_REORGANIZATION_SUMMARY.md
docs/guides/INDEX.md
docs/guides/PYPI_PUBLICATION_GUIDE.md
docs/guides/QUICK_PUBLISH_REFERENCE.md
docs/guides/README.md
docs/guides/README_APPROVAL.md
docs/installation/INSTALLATION.md
docs/installation/README.md
docs/legacy/LEGACY_ARCHIVE_STATUS.md
docs/legacy/LEGACY_FEATURE_MAP.md
docs/legacy/QUICKSTART_LEGACY.md
docs/legacy/README.md
docs/planning/DEVELOPMENT_RESUMPTION_PLAN.md
docs/planning/NEXT_SESSION_ISSUES.md
docs/planning/PHASE_1_ROADMAP.md
docs/planning/PHASE_3_IMPLEMENTATION_PLAN.md
docs/planning/PHASE_3_ITERATION_4_PLAN.md
docs/planning/PHASE_3_ITERATION_5_PLAN.md
docs/planning/PHASE_3_ROADMAP.md
docs/planning/PROPOSED_FEATURES.md
docs/planning/SECURE_CREDENTIALS_DEVELOPMENT_PLAN.md
docs/planning/SECURE_CREDENTIALS_STRATEGY_2025.md
docs/publication_logs/COMPLETION_SUMMARY.md
docs/publication_logs/PUBLICATION_READY.md
docs/publication_logs/README.md
docs/publication_logs/v1.0.3_beta/PRODUCTION_PYPI_PUBLISHED.md
docs/publication_logs/v1.0.3_beta/TEST_PYPI_VALIDATION_PASSED.md
docs/publication_logs/v1.0.3_beta/V1_0_3_BETA_PUBLICATION_READY.md
docs/publication_logs/v1.0.3_beta/V1_0_3_BETA_TEST_REPORT.md
docs/publication_logs/v1.0.3_beta/V1_0_3_DISTRIBUTION_REPORT.md
docs/publication_logs/v1.0.3_beta/V1_0_3_FINAL_STATUS.md
docs/publication_logs/v1.0.3_beta/v1.0.3_beta_publication_log.md
docs/quick_reference/deployment_operations.md
docs/quick_reference/github_operations.md
docs/quick_reference/infrastructure_operations.md
docs/reports/CodeSentinel_Intelligence_Report.md
docs/reports/FINAL_DOC_REVIEW_COMPLETION_REPORT.md
docs/reports/MEASUREMENT_TASK_M4_1_COMPLETION_REPORT.md
docs/reports/MEASUREMENT_TASK_M4_2_COMPLETION_REPORT.md
docs/reports/MERGE_READY_CHECKIN.md
docs/reports/PHASE_1_COMPLETION_REPORT.md
docs/reports/PHASE_2_COMPLETION_REPORT.md
docs/reports/PHASE_3_BRANCH_SETUP_COMPLETE.md
docs/reports/PHASE_3_COMPLETE.md
docs/reports/PHASE_3_ITERATION_1_COMPLETE.md
docs/reports/PHASE_3_ITERATION_2_COMPLETE.md
docs/reports/PHASE_3_ITERATION_3_COMPLETE.md
docs/reports/PHASE_3_ITERATION_4_COMPLETE.md
docs/reports/README.md
docs/reports/READY_FOR_PUSH_FINAL_SUMMARY.md
docs/reports/SYSTEM_OPERATIONAL_SUMMARY.md
docs/reports/TEST_CASE_T4_1_COMPLETION_REPORT.md
docs/reports/TEST_CASE_T4_2_COMPLETION_REPORT.md
docs/reports/templates/code_quality_audit.md
docs/reports/templates/security_audit.md
docs/reports/templates/sprint_progress.md
tests/test_archive_compression.py
tests/test_cli.py
tests/test_config.py
tests/test_core.py
tests/test_dev_audit.py
tests/test_docs_formatting.py
tests/test_integrity.py
tests/test_integrity_debug.py
tests/test_oracl_integration.py
tests/test_parser.py
tests/test_process_monitor.py
tests/test_python_compatibility.py
tests/test_session_memory_workflow.py
tests/test_system_integrity.py
tools/verify_version.py
tools/codesentinel/AGENT_INSTRUCTIONS.md
tools/codesentinel/AGENT_INTEGRATION_IMPLEMENTATION_GUIDE.md
tools/codesentinel/clean_unicode.py
tools/codesentinel/defrag_instructions.py
tools/codesentinel/duplication_detector.py
tools/codesentinel/manage_satellites.py
tools/codesentinel/psutil_benchmark.py
tools/codesentinel/report_generator.py
tools/codesentinel/report_workflow.py
tools/codesentinel/root_cleanup.py
tools/config/reporting.json