# Python
__pycache__/
*.py[cod]
*$py.class
*.egg-info/
*.egg
dist/
build/
*.whl

# Virtual environments
.venv/
venv/
env/

# IDE
.idea/
.vscode/
*.swp
*.swo
*~
.cursor/

# Ruff / linters
.ruff_cache/
.mypy_cache/

# Jupyter
.ipynb_checkpoints/

# OS
.DS_Store
Thumbs.db

# Data and outputs (not distributed with the package)
adata/
*_output/

# Archived legacy scripts, notebooks, and configs
archive/

# Unfinished Preprocessing Scripts
sc_preprocessing*