LICENSE
README.md
pyproject.toml
src/homoeogwas/__init__.py
src/homoeogwas/__main__.py
src/homoeogwas/calibration.py
src/homoeogwas/cli.py
src/homoeogwas/demo_data.py
src/homoeogwas/diagnostics.py
src/homoeogwas/gp.py
src/homoeogwas/grm.py
src/homoeogwas/interact.py
src/homoeogwas/io.py
src/homoeogwas/kernel.py
src/homoeogwas/khom_tier1.py
src/homoeogwas/lmm.py
src/homoeogwas/mcp_server.py
src/homoeogwas/plots.py
src/homoeogwas/prep.py
src/homoeogwas/scan.py
src/homoeogwas/sim.py
src/homoeogwas/species_config.py
src/homoeogwas/species_split.py
src/homoeogwas/workflow.py
src/homoeogwas.egg-info/PKG-INFO
src/homoeogwas.egg-info/SOURCES.txt
src/homoeogwas.egg-info/dependency_links.txt
src/homoeogwas.egg-info/entry_points.txt
src/homoeogwas.egg-info/requires.txt
src/homoeogwas.egg-info/top_level.txt
tests/test_calibration.py
tests/test_cli.py
tests/test_gp.py
tests/test_grm.py
tests/test_interact.py
tests/test_j3_hardening.py
tests/test_kernel.py
tests/test_kernel_fallback.py
tests/test_khom_tier1.py
tests/test_lmm.py
tests/test_lmm_diagnostics.py
tests/test_lmm_multi.py
tests/test_loco.py
tests/test_plots.py
tests/test_prep.py
tests/test_scan.py
tests/test_sim.py
tests/test_species_config.py
tests/test_species_split.py
tests/test_workflow.py