# MetaQuest v2.0.0a1 — stable Python dependencies
# For the external bioinformatics environment (Kraken2, Bracken, MEGAHIT,
# DIAMOND, etc.)
# use: conda env create -f environment/environment.yml

# ── Core Data Science ────────────────────────────────────────────────────────
numpy>=1.24
pandas>=2.0
matplotlib>=3.8
seaborn>=0.13

# ── Bioinformatics ───────────────────────────────────────────────────────────
biopython>=1.81
pyrodigal>=3.7.1,<4

# ── Configuration ────────────────────────────────────────────────────────────
pyyaml>=6.0
