.pre-commit-config.yaml
LICENCE
MANIFEST.in
THANKS.md
pyproject.toml
readme.md
requirements.txt
docs/CODE_OF_CONDUCT.md
docs/CONTRIBUTING.md
docs/banner.png
docs/config.md
docs/formats.md
docs/gonio.md
docs/gui.md
docs/index.md
docs/make_programs_md.py
docs/merlin.md
docs/network.md
docs/programs.md
docs/setup.md
docs/tem_api.md
docs/tvips.md
scripts/__init__.py
scripts/browser.py
scripts/center_images_smv.py
scripts/diagnose_beam_drift.py
scripts/learn.py
scripts/make_interval_movie.py
scripts/make_serialed_movie.py
scripts/process_dm.py
scripts/process_tpx.py
scripts/process_tvips.py
scripts/viewer.py
src/instamatic/__init__.py
src/instamatic/_collections.py
src/instamatic/_typing.py
src/instamatic/acquire_at_items.py
src/instamatic/admin.py
src/instamatic/banner.py
src/instamatic/browser.py
src/instamatic/controller.py
src/instamatic/exceptions.py
src/instamatic/goniotool.py
src/instamatic/gridmontage.py
src/instamatic/image_utils.py
src/instamatic/imreg.py
src/instamatic/io.py
src/instamatic/main.py
src/instamatic/montage.py
src/instamatic/tools.py
src/instamatic.egg-info/PKG-INFO
src/instamatic.egg-info/SOURCES.txt
src/instamatic.egg-info/dependency_links.txt
src/instamatic.egg-info/entry_points.txt
src/instamatic.egg-info/requires.txt
src/instamatic.egg-info/top_level.txt
src/instamatic/camera/CCDCOM.h
src/instamatic/camera/CCDCOM2_x64_gatan.dll
src/instamatic/camera/CCDCOM2_x64_simulation.dll
src/instamatic/camera/CCDCOM2_x86_gatan.dll
src/instamatic/camera/CCDCOM2_x86_simulation.dll
src/instamatic/camera/EMCameraObj.dll
src/instamatic/camera/gatansocket3.md
src/instamatic/camera/mpxhwrelaxd.dll
src/instamatic/camera/timepix.lockfile
src/instamatic/camera/tpx/171207_with_flatfield.bpc
src/instamatic/camera/tpx/171207_with_flatfield.bpc.dacs
src/instamatic/camera/tpx/HW.dacs
src/instamatic/camera/tpx/config.txt
src/instamatic/config/defaults.yaml
src/instamatic/config/settings.yaml
src/instamatic/config/alignments/neutral.yaml
src/instamatic/config/calibration/orius.yaml
src/instamatic/config/calibration/simulate.yaml
src/instamatic/config/calibration/timepix.yaml
src/instamatic/config/calibration/tvips-f416.yaml
src/instamatic/config/camera/merlin.yaml
src/instamatic/config/camera/orius.yaml
src/instamatic/config/camera/serval.yaml
src/instamatic/config/camera/simulate.yaml
src/instamatic/config/camera/simulateDLL.yaml
src/instamatic/config/camera/timepix.yaml
src/instamatic/config/camera/tvips-f416.yaml
src/instamatic/config/camera/tvips-xf416.yaml
src/instamatic/config/microscope/fei_simu.yaml
src/instamatic/config/microscope/fei_themisZ.yaml
src/instamatic/config/microscope/jeol-1400.yaml
src/instamatic/config/microscope/jeol.yaml
src/instamatic/config/microscope/simulate.yaml
src/instamatic/config/scripts/readme.md
src/instamatic/neural_network/weights-py2.p
src/instamatic/neural_network/weights-py3.p
src/instamatic/processing/PETS_input_keywords.csv
tests/__init__.py
tests/conftest.py
tests/test_camera.py
tests/test_collections.py
tests/test_ctrl.py
tests/test_deprecated.py
tests/test_experiments.py
tests/test_formats.py
tests/test_grid_mapping.py
tests/test_merlin_io.py
tests/test_pets_input.py
tests/test_tools.py
tests/test_utils.py
tests/utils.py
tests/config/defaults.yaml
tests/config/settings.yaml
tests/config/calibration/calib_stage_rotation.yaml
tests/config/calibration/test.yaml
tests/config/camera/test.yaml
tests/config/microscope/test.yaml