LICENSE
README.md
pyproject.toml
src/pi_metaboqc.egg-info/PKG-INFO
src/pi_metaboqc.egg-info/SOURCES.txt
src/pi_metaboqc.egg-info/dependency_links.txt
src/pi_metaboqc.egg-info/requires.txt
src/pi_metaboqc.egg-info/top_level.txt
src/pimqc/__init__.py
src/pimqc/pipeline.py
src/pimqc/config/__init__.py
src/pimqc/config/resolution.py
src/pimqc/config/schema.py
src/pimqc/core/__init__.py
src/pimqc/core/model.py
src/pimqc/dataset/__init__.py
src/pimqc/dataset/builder.py
src/pimqc/dataset/visualization.py
src/pimqc/io/__init__.py
src/pimqc/io/utils.py
src/pimqc/processing/__init__.py
src/pimqc/processing/assessment/__init__.py
src/pimqc/processing/assessment/analysis.py
src/pimqc/processing/assessment/visualization.py
src/pimqc/processing/correction/__init__.py
src/pimqc/processing/correction/algorithms.py
src/pimqc/processing/correction/analysis.py
src/pimqc/processing/correction/visualization.py
src/pimqc/processing/filtering/__init__.py
src/pimqc/processing/filtering/analysis.py
src/pimqc/processing/filtering/visualization.py
src/pimqc/processing/imputation/__init__.py
src/pimqc/processing/imputation/analysis.py
src/pimqc/processing/imputation/visualization.py
src/pimqc/processing/normalization/__init__.py
src/pimqc/processing/normalization/analysis.py
src/pimqc/processing/normalization/visualization.py
src/pimqc/reporting/__init__.py
src/pimqc/reporting/utils.py
src/pimqc/resources/demo/pipeline_parameters.json
src/pimqc/resources/demo/pipeline_parameters.toml
src/pimqc/resources/demo/project_intensity.csv
src/pimqc/resources/demo/project_meta.csv
src/pimqc/statistics/__init__.py
src/pimqc/statistics/metrics.py
src/pimqc/statistics/pca.py
src/pimqc/statistics/selection.py
src/pimqc/templates/report_brief.md.j2
src/pimqc/templates/report_comprehensive.md.j2
src/pimqc/visualization/__init__.py
src/pimqc/visualization/base.py
src/pimqc/visualization/plot_utils.py
tests/test_bpca_r_bridge.py
tests/test_config_resolution.py
tests/test_correction_blank_policy.py
tests/test_correction_loess_options.py
tests/test_dataset_builder.py
tests/test_io_utils.py
tests/test_metanorm_rloess_bridge.py
tests/test_pipeline.py
tests/test_qrilc_r_bridge.py
tests/test_quantile_r_bridge.py
tests/test_reporting_templates.py
tests/test_ruviii_r_bridge.py
tests/test_selection.py
tests/test_serrf_r_bridge.py
tests/test_vsn_r_bridge.py
tests/test_waveica2_r_bridge.py