{% extends "layout_bs4.html" %} {% from "variants/utils.html" import compounds_table, svs_table, snv_filters, cell_rank %} {% from "variants/components.html" import gene_cell, frequency_cell %} {% block title %} {{ super() }} - {{ institute.display_name }} - {{ case.display_name }} - {{ form.variant_type.data|capitalize }} variants {% endblock %} {% block css %} {{ super() }} {% endblock %} {% block top_nav %} {{ super() }} {% endblock %} {% block top_nav_right %} {{ super() }} {% endblock %} {% block content_main %}
{{ snv_filters(form, institute, case) }}
{% for variant in variants %} {% if variant.dismiss_variant %} {% else %} {% endif %} {% else %} {% endfor %}
Rank Score Chr. Gene PopFreq CADD Gene annotation Func. annotation Inheritance model Overlapping
{{ cell_rank(variant, institute, case, form, manual_rank_options) }} {{ variant.rank_score|int }} {{ variant.chromosome }} {{ gene_cell(variant) }} {{ frequency_cell(variant) }} {{ cell_cadd(variant) }} {% for annotation in variant.region_annotations %}
{{ annotation }}
{% endfor %}
{% for annotation in variant.functional_annotations %}
{{ annotation }}
{% endfor %}
{{ cell_models(variant) }} {{ overlapping_cell(variant) }}
No matching variants
{{ footer() }}
{% endblock %} {% macro cell_cadd(variant) %}
{{ variant.cadd_score }}
{% endmacro %} {% macro cell_models(variant) %} {% for model in (variant.genetic_models or []) %} {{ model }} {% endfor %} {% if variant.compounds %} Compounds {% endif %} {% if variant.mosaic_tags %} mosaic {% endif %} {% endmacro %} {% macro overlapping_cell(variant) %} {% if variant.overlapping %} Overlapping SVs {% else %} - {% endif %} {% endmacro %} {% macro footer() %}
{% if more_variants %}
{% else %} No more variants to display {% endif %}
{% endmacro %} {% block scripts %} {{ super() }} {% endblock %}