{% extends "layout_bs4.html" %} {% from "variants/components.html" import gene_cell, frequency_cell %} {% from "utils.html" import comments_table %} {% block title %} {{ super() }} - {{ institute.display_name }} - All SNVs and INDELs {% endblock %} {% block top_nav %} {{ super() }} {% if config.SHOW_CAUSATIVES %} {% endif %} {% endblock %} {% block content_main %}
{{ filters_form() }}
{% for variant in variants %} {% if variant.dismiss_variant %} {% else %} {% endif %} {% else %} {% endfor %}
Case : Score Gene PopFreq CADD Gene annotation Func. annotation HGVS
{{ cell_rank(variant) }} {{ gene_cell(variant) }} {{ frequency_cell(variant) }} {{ cell_cadd(variant) }} {% for annotation in variant.region_annotations %}
{{ annotation }}
{% endfor %}
{% for annotation in variant.functional_annotations %}
{{ annotation }}
{% endfor %}
{{ variant.hgvs }}
No matching variants
{{ footer() }}
{% endblock %} {% macro cell_rank(variant) %} {{ variant.case_display_name}} : {{ variant.rank_score|int }} {% endmacro %} {% macro cell_cadd(variant) %}
{{ variant.cadd_score }}
{% endmacro %} {% macro footer() %}
{% if more_variants %}
{% else %} No more variants to display {% endif %}
{% endmacro %} {% macro filters_form() %} {{ form.csrf_token }}
{{ form.hgnc_symbols.label(class="control-label") }} {{ form.hgnc_symbols(class="form-control") }}
{{ form.variant_type.label(class="control-label") }} {{ form.variant_type(class="form-control") }}
{{ form.phenotype_terms.label(class="control-label") }} {{ form.phenotype_terms(class="form-control") }}
{{ form.phenotype_groups.label(class="control-label") }} {{ form.phenotype_groups(class="form-control") }}
{{ form.cohorts.label(class="control-label") }} {{ form.cohorts(class="form-control") }}
{{ form.similar_case.label(class="control-label") }} {{ form.similar_case(class="form-control") }}
{{ form.filter_variants(class_="btn btn-primary form-control") }}
{% endmacro %} {% block scripts %} {{ super() }} {% endblock %}