DAY-EC activated.
DAY-EC activated.
time=2026-06-03T08:34:55Z
squeue=61|bcl2fq|sleep_test.sh|CF|0:06|bcl2fq-dy-nvme64-1;62|i192bigmem|merge_bclconvert_tile_shards-merge_bclconvert_tile_shards_L003|R|0:02|i192bigmem-dy-all-1;
fastq_count=84
done_count=1
bytes=6102406897
fsx_scratch_size=98K

log_tail=WARNING: skipping lane 8 because RunInfo.xml file lists no tiles for it
Index Read 2 is marked as Reverse Complement in RunInfo.xml: The barcode and UMI outputs will be output in Reverse Complement of Sample Sheet inputs.
Sample sheet being processed by common lib? Yes
SampleSheet Settings: 
  BarcodeMismatchesIndex1 = 0
  BarcodeMismatchesIndex2 = 0
  FastqCompressionFormat = gzip
  OverrideCycles = Y151;I10;I10;Y151
  SoftwareVersion = 4.0.3

shared-thread-linux-native-asio output is enabled
WARNING: shared-thread-linux-native-asio output could have low performance or hang if output directory is on a distributed file system
bcl-convert Version 00.000.000.4.0.3
Copyright (c) 2014-2022 Illumina, Inc.
Command Line: --bcl-input-directory /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4 --output-directory /fsx/scratch/tmp/dayoa_bclconvert_60/fsx_run_dir_mounts_20260514_LH01106_0009_B23TVLGLT4_fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_fsx_scratch_tmp_20260603T082415Z_tile_fastqs_L003_0001_tiles0001-0008/output --sample-sheet /fsx/run_dir_mounts/20260514_LH01106_0009_B23TVLGLT4/fasts_from_bclconvert_l003_8tile_tilesmoke_odirect_on_fsx_scratch_tmp_20260603T082415Z/tile_reports/L003/0001_tiles0001-0008/SampleSheet.csv --strict-mode false --first-tile-only false --bcl-sampleproject-subdirectories false --fastq-gzip-compression-level 1 --bcl-num-parallel-tiles 24 --bcl-num-conversion-threads 4 --bcl-num-compression-threads 64 --bcl-num-decompression-threads 32 --shared-thread-odirect-output true --output-legacy-stats true --num-unknown-barcodes-reported 1000 --tiles s_3_1101+s_3_1102+s_3_1103+s_3_1104+s_3_1105+s_3_1106+s_3_1107+s_3_1108 
Conversion Begins.
# CPU hw threads available: 64
Parallel Tiles: 24. Threads Per Tile: 4
SW compressors: 64
SW decompressors: 32
SW FASTQ compression level: 1
Conversion Complete.
moving BCL Convert output from scratch to final output directory: 2026-06-03T08:34:35+00:00

Number of files: 125 (reg: 120, dir: 5)
Number of created files: 123 (reg: 120, dir: 3)
Number of deleted files: 0
Number of regular files transferred: 120
Total file size: 6.10G bytes
Total transferred file size: 6.10G bytes
Literal data: 6.10G bytes
Matched data: 0 bytes
File list size: 0
File list generation time: 0.007 seconds
File list transfer time: 0.000 seconds
Total bytes sent: 6.10G
Total bytes received: 5.59K

sent 6.10G bytes  received 5.59K bytes  452.14M bytes/sec
total size is 6.10G  speedup is 1.00
Filesystem                Size  Used Avail Use% Mounted on
10.0.1.213@tcp:/xtlzxb4v  6.6T  418G  6.2T   7% /fsx
10.0.1.213@tcp:/xtlzxb4v  6.6T  418G  6.2T   7% /fsx
10.0.1.213@tcp:/xtlzxb4v  6.6T  418G  6.2T   7% /fsx
run_bclconvert_lane L003 finished: 2026-06-03T08:34:48+00:00
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