phospy/__init__.py,sha256=sWPaX854tLH2y1XiTTLQ9xzkqHALnMqrOXCSkRiYJhw,516
phospy/api/__init__.py,sha256=eBOK2O4il-Kywura7rz1keauSqERQgP63CorRkeBsqo,11635
phospy/api/builders.py,sha256=ifpMNylT6X6N4v1TOLLzFkuvc-WR-UUzwOb5ZY2PzuI,253
phospy/api/datasets.py,sha256=x9SEU0dF3xzogFGiwI3ZwlGE5hDyNjcI-rLo9qrEUZg,1230
phospy/api/enums.py,sha256=t3f27ArKdKNtYL0RW8CVWl0EJXpRqRMKbqBSuWNqYLg,135
phospy/api/requests.py,sha256=8XunzZlqxD_WbwVKzftZBhXXLrUKv4R5W3HEInB2hmk,2615
phospy/api/results.py,sha256=7ZzIUl8uFu2nwrbLsIcVbwpMLVBHJ3SDyCOb1XbdAVc,2662
phospy/api/workflows.py,sha256=BhHCLOnTOAH2o9xabCQl0mrPqFEcGrqFwfRXAYRIbco,426
phospy/api/configs/__init__.py,sha256=s-XQ0H66cM67A2JEGKFHzbA1uWcdjyBlotg5u4Ue-ok,20797
phospy/api/configs/common.py,sha256=q7qoefOm9DFTaP7lADKYMgGmmz23G3bVAUuBbtDeRF8,244
phospy/api/configs/dataset.py,sha256=7Q9lDZxlYTymVQy10TX6kzA5u3U-EUZDowxMTp1GGQI,199
phospy/api/configs/differential.py,sha256=h2t95PESTfd8o7qGmMvQzvjTwAlyiU05Rgxr-9FNoH0,1066
phospy/api/configs/enrichment.py,sha256=e3OUJu_Ej0EitkRraQu8X0GtGuXefKykK0tPRqiX-Dc,1492
phospy/api/configs/kinase.py,sha256=MjMAK52Y7g5hYPMO3wgbGB-HivYOOdoBpkDyDwxxOVg,4524
phospy/api/configs/localisation.py,sha256=3j_UsAwLk1V6g_v-9eV306ny7ho_9A7uPL3ed7u9gbs,556
phospy/api/configs/prediction.py,sha256=lFHbomsGAT_1GKcqUrv1_3Hz28L43AxwxwmyIwPQ69A,1098
phospy/api/configs/references.py,sha256=BSC_JcaUfeemu59kO_qRnjqD_Kar7NE9vgNt5AVQ8us,93
phospy/api/configs/signalome.py,sha256=LeWhFyKl66Cl44KAJY7jsLi2VhmhPGz8uHlu2WnlKVg,3505
phospy/api/configs/preprocessing/__init__.py,sha256=bWQ5aBaV5EVnjXQyFz-Y9YyUFLbSwjBwrekpeeaSKuw,9439
phospy/api/configs/preprocessing/batch_correction.py,sha256=mzVFz1o-5nJ1I_UUU74dep4hPwXRHUMGIIrjY6MtAts,586
phospy/api/configs/preprocessing/comparisons.py,sha256=jpUGDBrwSUMi0tU8BjJe_V5Lyjyq1ekl1MvHYdmM0cI,787
phospy/api/configs/preprocessing/intensity_transform.py,sha256=vVgjeN01RYm1zSw3pTwbCTrjJ3UYWhXJIeH5WBxX36o,589
phospy/api/configs/preprocessing/localisation.py,sha256=uzLpMY4QGNILXLY0Z_wcCjpC_ULWiH6oBLGs0uiq9Q0,636
phospy/api/configs/preprocessing/missing_data.py,sha256=ZvDqPPiKuuw8xGv1dZ4TAJs6FTkCBMcYCdRNbmqJ-Gg,722
phospy/api/configs/preprocessing/normalisation.py,sha256=_PtvpfNJgYkC3ZidmZBcJUmFQVHi3-VXU0qImo0njkQ,625
phospy/api/configs/preprocessing/site_matrix.py,sha256=FXz-_W2_gccbavb7DvyqAERqsVD5XG0A47UUBE4DdjE,1561
phospy/api/configs/preprocessing/site_sequence.py,sha256=vLAmPIY0-1ZMGUe541brw4d4AISneEnNCFs0491uXHM,1527
phospy/api/configs/preprocessing/total_protein.py,sha256=VGGjIEs2PGc-tI_sNiDCJ6QfswoNsLGiYCmo-rYGHEE,3647
phospy/contracts/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
phospy/contracts/requests.py,sha256=Zsks2JzzQKkkxBPX1LfEQWxbe3BqS-IwdfBvakvz-Rw,12904
phospy/contracts/results.py,sha256=8O-SCwgmhQNubhw-nBId3ujjOJ4IGIs4Ouwv2ru56lY,39945
phospy/contracts/configs/__init__.py,sha256=jdoBO8CWihtdAlmY-hdFOIe1-4REnceHLOOdBLabC7s,21200
phospy/contracts/configs/common.py,sha256=X0JJ8RZXRIEgoCy7W9W6bR84EbMXTr4GDzFGA9GLGrA,357
phospy/contracts/configs/dataset.py,sha256=kR2wheD_owhEM74oRZpE6xq--d18deMmuQIHEaRfq-Q,8832
phospy/contracts/configs/differential.py,sha256=3x6wBlBHBSw8s5gvLjTQzri6c4Spgs99ut4qV6U8sDw,5484
phospy/contracts/configs/enrichment.py,sha256=Sspr3FTNO852q9AC2MbrIog3cu8t193-0zM4tB8Xi5g,3114
phospy/contracts/configs/kinase.py,sha256=UF_M8KnYTMWCYmDGykEmLNkeW1Qq4OwhYeQKsj10AvI,16494
phospy/contracts/configs/localisation.py,sha256=fpEW-HaOF-Dj2S6S15GOvM8ayi7Lp6oOw47ZctRqwBA,2192
phospy/contracts/configs/prediction.py,sha256=x5Hco7bBt4r6Uml-5XNeQtx-ob9cemqho3Y_cZarUAc,5178
phospy/contracts/configs/references.py,sha256=6iDgmJfIHfvJ8dbEsBuwja8Q4QmgfOwpj2dTLx1TMmQ,265
phospy/contracts/configs/signalome.py,sha256=Ng_PZOwVyedRLIno_8Lf1C-BwBtC0scOptroQuzcdLQ,15330
phospy/contracts/configs/preprocessing/__init__.py,sha256=IMaGf2HCjLQ3tNF_OuyCcYafCEQTmdxdfyV_d5mtOdY,10033
phospy/contracts/configs/preprocessing/batch_correction.py,sha256=L2IfrsEefJV7zjnoUOblB_C7F4oeluCKcS21UWuRzn8,2047
phospy/contracts/configs/preprocessing/comparisons.py,sha256=uuCreWWxBV3_yLHbucO_Dh3zF5JFHPYN0L7YJgPAyUY,2435
phospy/contracts/configs/preprocessing/intensity_transform.py,sha256=hHSyxJAsdHWRMVK-rkc9X35Ni3TiFfV8xz9eAVB4kZ8,1531
phospy/contracts/configs/preprocessing/localisation.py,sha256=SjTsB-rJP7TrmkoWoZQHQWsdLb3VKvbu2nrm7Hyep8w,1795
phospy/contracts/configs/preprocessing/missing_data.py,sha256=syDnab6Xdb3zmQI4d3owTNRT-Lq017dgoakOAknNrCU,3571
phospy/contracts/configs/preprocessing/normalisation.py,sha256=bz6enSbBhys5Xh22X1cSvk_ADGoGjhc9yK6sAAsQs_A,1513
phospy/contracts/configs/preprocessing/site_matrix.py,sha256=wqq0J0EWqqstwgq4nSft3sfdI5S3R3BwYEvvqDoJ-JU,5861
phospy/contracts/configs/preprocessing/site_sequence.py,sha256=3E9KT3vU-QZpaHc35t1-Ir7F1MiPBE9YydNtTPBwV-I,5202
phospy/contracts/configs/preprocessing/total_protein.py,sha256=GuqiBkadJA_SM6QCaPEFAEni-_iBXxV5FFLwUwcsa9E,10349
phospy/data/reference_bundles/rat/l6_native/manifest.json,sha256=OfMDmI4DwSgjwvisBsc9_EZUDJwvQlTvQnWDz5Xbsvg,4290
phospy/data/reference_bundles/rat/l6_native/motif_scores.csv,sha256=4LWEV1DxezhAgkLbgSlOl-HxPtWeGHYBI1wocPhm3Yo,1041872
phospy/data/reference_bundles/rat/l6_native/motif_sizes.csv,sha256=a_JjfhYJbGxVydJ8nm7Dnv2FckZcQDNB9MnKmGD5vOw,2539
phospy/data/reference_bundles/rat/l6_native/site_sequences.csv,sha256=2iY-axfqyJv6v86-oQaaPhaFVu9DVc0No9y52zzbVyU,26213
phospy/data/reference_bundles/rat/l6_native/substrate_map.csv,sha256=4McOib8yOm_64aPxPrIx3ARiyVuAFGtauwrd32pmZSw,2298
phospy/errors/__init__.py,sha256=4NXX4-92lXFb2LoGUSDTNhmfVXNZn8paoahPPDW9KHQ,1789
phospy/errors/base.py,sha256=2civhsD9h8Ff_p3FMiE1aBo8Y2vucTniBREn5VIimY4,117
phospy/errors/build.py,sha256=tJdp5di0YzggaXZ_zicntbV4gSwfvGjYJxCrKe_bOog,286
phospy/errors/input.py,sha256=SEO_kb5luZsil0U7P14wjtduiCCVSg_p2zG4p6sxPk8,458
phospy/errors/references.py,sha256=BdEUgRCPKIxa7xDQmKyOQYwXBwv_eiXqMQXUeMib78E,551
phospy/errors/transformations.py,sha256=QiEO8Kkoe3wiGodiW4YYzUXevX819kbugwi1Ws7lvSI,607
phospy/errors/validation.py,sha256=-A9GvLOu61I36cXm8p0ViVOy7Bc3KaCKkNVrhhKtHZk,1365
phospy/errors/workflows.py,sha256=Zky-l6fm-YnFh66GQ6YRnn_3xtwlxXkx-AMOJ9GA8HU,2358
phospy/frames/__init__.py,sha256=vTol2Np9Xf3DsbzzqQYopbfIg2POW04KYsnyHyM-7Ck,483
phospy/frames/ownership.py,sha256=lq4Kv-NLkZ3yhqOxb9yD4N4poC5UhFlpIga2dWmOlNM,5338
phospy/io/__init__.py,sha256=crhkFrCKZtHm9eSbfigdL8Ql2TM5RR8uNbtggRgRlWU,872
phospy/io/bundles/__init__.py,sha256=S-5Wn_ui-WalITIntNWdintyJOKDrcRq6hBPeP_b250,996
phospy/io/bundles/kinase.py,sha256=4J7Bn-B7xSUnbLCev7qdbab7RwJZ-eSrVmenD8dNFVg,635
phospy/io/bundles/reference_sources.py,sha256=sJnaF4dxfu141VAc4z7sORcptuimxc0HNi-IOj9ssBo,3372
phospy/io/bundles/signalome.py,sha256=HzaDVRo4VeRZFhlc-CV3oV0aFhVNW_HWU5QuaavPbQc,683
phospy/io/bundles/_kinase/__init__.py,sha256=S_D9R0hYitk9IOInT5S8rAsbunxwzfX8JVG3ucXV0Qo,56
phospy/io/bundles/_kinase/constants.py,sha256=L95kSfgpg6j_ecZOH6d3jhy6-IpZKOjGf_tBHWcI-J8,223
phospy/io/bundles/_kinase/loader.py,sha256=xKD1ak2DVsRooJCdCAGzFKtI6J6Ve7OP-RhTlNmZl90,1679
phospy/io/bundles/_kinase/manifest.py,sha256=NJUS3pP6F1c2D5-8pwFgZSjH66hu-o7eGjwOI3HaB-Y,16365
phospy/io/bundles/_kinase/models.py,sha256=vVXc5NihxDAURnSYd3Hr0PjMKusy-oqbYuUod5AvXBk,464
phospy/io/bundles/_kinase/reconstruction.py,sha256=RqKGBCvNaVh8ObE6ijenub4QXZF6GfzwaRD_Y0DuerI,14115
phospy/io/bundles/_kinase/snapshots.py,sha256=I7PhD0xY72KfM3l4LPQKtAPUjI7KOXyYJ3cnUoSI8C8,17014
phospy/io/bundles/_kinase/writer.py,sha256=sLOP5OXCLnqCG3DX7cLJGw4GFl7yv99rnNeO9rRCLDM,10936
phospy/io/bundles/_shared/__init__.py,sha256=rfPJ5xUT51j7SiHTbAQoeRKZHjCZC-qV_riUPyUHrCE,68
phospy/io/bundles/_shared/intensity_scale_state.py,sha256=vN7aTCf-FAFw5LjpgyIK36GnZneIWIexTTS3P9P3JDc,3848
phospy/io/bundles/_shared/json_files.py,sha256=e0wYe0oSpcpQ2ltFgaIQmfmKtk9_xp3HL16g3jjiTFs,1228
phospy/io/bundles/_shared/organisms.py,sha256=unJqUEka3TBPmHzgXNjVvYo6L6sLfaLiFzjBcKzp7_s,959
phospy/io/bundles/_shared/paths.py,sha256=3TYYhh8__R8PIKoahkgJGsSnRGMKNabjPeOV5IgR8gI,881
phospy/io/bundles/_shared/primitives.py,sha256=kkJiJXG_7JtRupi58Mj3T89em1unDuQornh27toCzig,3665
phospy/io/bundles/_shared/processing_state.py,sha256=TdX6XwKBbTgA4tvrn38xUaAUo938URDC_9xTPMhJDvk,33244
phospy/io/bundles/_shared/tables.py,sha256=EgyzOj_p_TtW2aPQvxPyQlIJULKmJ7usWbwgb7hA6aE,2993
phospy/io/bundles/_signalome/__init__.py,sha256=7thhbPUFgJGdl31EvhxpgziR-PFjT7uM4m2zgPqltmc,59
phospy/io/bundles/_signalome/config.py,sha256=fN1SE0MFj8dgg_PrLP_-JBPCWrzaNylL4TXEHScakx0,10937
phospy/io/bundles/_signalome/constants.py,sha256=TBv00kbHCZPQBN9_kg2o1rTvjly-vXAktpqjlnJH7qQ,235
phospy/io/bundles/_signalome/diagnostics.py,sha256=AqESCaAcXRt4p9sIB-1fqW7m5rGb_1V8KMSI4uDpToM,19886
phospy/io/bundles/_signalome/loader.py,sha256=u_PdIR5PwMjqae1HzVbFEvbiciX04zByXCrbqfMRwPk,1738
phospy/io/bundles/_signalome/manifest.py,sha256=nTtvsnbA7mX2GqMiJNy2WnD5qzEoDcuUmcGEMn_08-M,19412
phospy/io/bundles/_signalome/models.py,sha256=vdDHAut9Mp3CtM301g6Q0IWb5_G0FUU-RvslLYG0u7o,488
phospy/io/bundles/_signalome/primitives.py,sha256=vu0JIuNGa85DcmYLjQD0vD5YR1OiCWxWme1aPSaUNns,1631
phospy/io/bundles/_signalome/reconstruction.py,sha256=Ehdnn9_TN7ruSEINjWjRvMQKGuE7t64Nad_R6EmJ8zw,22832
phospy/io/bundles/_signalome/snapshots.py,sha256=1R7ZctdDpqLdsNMtEgphpsfLLDwppWIUG5RvJQTwzII,4597
phospy/io/bundles/_signalome/tables.py,sha256=DOosVgTBN9-m2Ioj7Bm57pyDtYQi7JqgM_6yOSMQU0Y,4279
phospy/io/bundles/_signalome/writer.py,sha256=dYd262Uk_CU3Zh4s5ROILiIGUZ4dDKxs0B7ZbX4QyuA,13580
phospy/io/publishers/__init__.py,sha256=nucCNOEHEYxpwnKPfVjCxJ4DRTmZoqXgn2BSGFWpdDo,290
phospy/io/publishers/workflows.py,sha256=c4Qq0iH2laFzw9ohZo8xp-qMAXLJiePsB54hmQoCzp8,25668
phospy/io/readers/__init__.py,sha256=vTAFQhhtgEU3IJWQRL4tgFleHuXDKmLM0A4XkQyby_0,3385
phospy/io/readers/enrichment_sets.py,sha256=trMrN-caBGEH3hW7h_HsY9PsrGr80pvN8ExZoN0cWXw,18808
phospy/io/readers/fragpipe.py,sha256=DF22I9s48ZU7hPAUrF8HSxudaA0i8HSxR7c0TYanySQ,57242
phospy/io/readers/importers.py,sha256=I9IJhxjerUpGzm5ki-gIUqHuXTl9RFYyeVZr2J1Ce34,22756
phospy/io/readers/maxquant.py,sha256=kS8GIyhfgZUCzxVP7L5IVuCaVTGNpzDYNEVtDHJWTIw,39146
phospy/io/readers/tables.py,sha256=-PiTtZi7DlGu34VrgoFSbgEzrmRuyGNauJAtH7OsWJI,12161
phospy/policies/__init__.py,sha256=M83Z-CknD5ohl933QXwEzR8iJuVR6-hB1blpt034BRQ,113
phospy/policies/policy_base.py,sha256=Kf3IWqfF-R5cU8RtPThhXujokIdApN9QH-fs69OCnl0,759
phospy/provenance/__init__.py,sha256=diG8jYZkdoQopcSqh5meEqf61QFtIk7Ch5YMmppp1rM,1607
phospy/provenance/environment.py,sha256=I8eQYfCF6oged5NE9cKQQtlfghRRQ8lM20YlVTvMcmU,11121
phospy/provenance/hashing.py,sha256=tocwUbjO9pYYND67-ViORbGpUmXxpAS9qK76TzfkRXc,11171
phospy/provenance/models.py,sha256=e3h8waJ6G1pmFIfCVckrIrYwWjakHfioPVYXPExAFXo,5265
phospy/provenance/references.py,sha256=l7K_Shl8nVI0qdtxe41Q4zsbPx_BR0utPI4wb2I5azE,1279
phospy/provenance/scientific_policy_models.py,sha256=R1vK6ktdeVPwZSx-MofCSHv5xX6WidgJctxyrVI1Sr8,4560
phospy/provenance/serialization.py,sha256=_Xpl0B_C5Xash3UZpbZCP3gr_8Y04dPpCbxB9yeF6oE,34371
phospy/science/__init__.py,sha256=sttmYToI3I8fkWx89_vmFxNT2DykSNqx0I1-YTouXeE,537
phospy/science/activities/__init__.py,sha256=n-w8GeT8uUyFoPeaT2PBhjfostZqBYzHOrKKVLVBsWc,867
phospy/science/activities/models.py,sha256=PpmJiv_Sc55Kp5qcHjTG8JdZ922yXl-VTS2eEst6IlM,36504
phospy/science/activities/scientific_policies.py,sha256=-ixBuSwgEq0UH2FWMmQynicILKTad8ejsOWmBJVjwxE,6333
phospy/science/activities/scoring.py,sha256=LafWw-2krYA1dPy3XwOgK8ZewRHwiNH_X_EShQS0THg,3690
phospy/science/activities/statistics.py,sha256=97QUHDL5BM6SjJbUA_K4xGH1fdMx9BR1TDpRuLigTB8,779
phospy/science/activities/threshold_membership.py,sha256=2H-HOk8oNbTsjdMZyLr78EZOL6jzUQjh_74_sG7nj6g,7611
phospy/science/activities/methods/__init__.py,sha256=18DDMH7O4KGbuMclWWKWHhhEhaV97UXbNG5ZiUtlNcQ,1031
phospy/science/activities/methods/ksea_zscore.py,sha256=_LPdzHeowBtT3Q1gU9swr4gfFa81rfanA-ESrFp8MLQ,14862
phospy/science/activities/methods/ssgsea_substrate_enrichment.py,sha256=QXpai7JTSL-YncR7HFctcZ57wZ2CXwhXZWdtV7gUCCM,21889
phospy/science/activities/methods/weighted_substrate_activity.py,sha256=rsJgiapjhETg6L0MeEMDzZ-xEY-NAJiHak6n1pyCtHc,13493
phospy/science/datasets/__init__.py,sha256=e2Nl3KQKzrh2rlYJwLpZgWGFG_B_559aupgTmxWnXTI,1007
phospy/science/datasets/internal_view.py,sha256=MXDYMTbsOPh-aZ_ZtfXEmh20sr3lFLyOZFjRp5gM2Cc,1723
phospy/science/datasets/models.py,sha256=kQEIJMkKQZFuSKDkTzaVMSSAhchzT9rr-jImFV7BAT0,53022
phospy/science/datasets/processing_state.py,sha256=kYMjHhf_3buXM11LxM9pVwZbILS8xqK3HSbwUj2jLTs,1537
phospy/science/datasets/_processing_state/__init__.py,sha256=qHtRXdQPEf1YX8fehIrh2jDUc5AsHDrjSUq2zFDZmpE,41
phospy/science/datasets/_processing_state/json_contracts.py,sha256=dcWA5_BUDqN3GCDq1PEnDh2iHP3i2ErEjEYfPMqjKKk,9153
phospy/science/datasets/_processing_state/missing_data.py,sha256=KZ05RQeQthxj4At6-MSvoMQ4Qy8M1t1ETxccpWMAofU,23967
phospy/science/datasets/_processing_state/models.py,sha256=YUu24ItRsXhPZPCRMpi6tSHHk_KktSXfY4C14nsuQhM,6925
phospy/science/datasets/_processing_state/total_protein.py,sha256=KHiPqGZrqd-lGztn6sooFWhfy6h6ZPLMZrbIphTXm6c,29477
phospy/science/datasets/builders/__init__.py,sha256=K_AFb4C2b92suHQLXG7SkptxPVp-rp-WC5qm-qRE3Ms,164
phospy/science/datasets/builders/contracts.py,sha256=00NMuR6Zn31GVlDDZUPKa9eav8Y6jTZzCQdP0zR3FUM,4372
phospy/science/datasets/builders/executor.py,sha256=4t206n0j-8B3TnE151BHTGS7wpDCo8S4pzC1W1NM4-s,7778
phospy/science/datasets/builders/interpreter.py,sha256=P-JwLykZnCSaxL8ypt3o890Qp6QJO_UQ3AZxpy_fJpo,5063
phospy/science/datasets/builders/interpreter_collaborators.py,sha256=wbFVhu8rMlZ0FyId4S3jZRBaUHeeuqnXjH98mhOF504,25170
phospy/science/datasets/builders/normalization_reporter.py,sha256=gQTmawuUhywCQ5SpyV6obiYURjLSiVG_Ni-fsgF6Krw,8497
phospy/science/datasets/builders/normalizer.py,sha256=ceMIBo98NKBGr6CaM0Wqyd-fCJXHGx50BOA1HUeDYk4,4553
phospy/science/datasets/builders/preprocessing.py,sha256=bP_P1bKkMlju9FhzEOxLsQRP3abhrefOUa-4mFVQ0uw,5727
phospy/science/datasets/builders/provenance_assembler.py,sha256=FT6GY5UBAlNb7FtmbeRjLCe_SGxeXGnh7hXWkCpYIVM,16089
phospy/science/datasets/builders/public.py,sha256=e7VhLrVTBi6ZeuWUVP5kEPyNymM5nYqUVsJTa_qAEjI,1491
phospy/science/datasets/builders/reader.py,sha256=ED-7S-R26zE3Cv45PGYDsG-aqJi7z8MwEk-P5giIpu4,2643
phospy/science/datasets/builders/report_assembler.py,sha256=RG5tyuwj_8QpGVKf5JWgk9mlrF24f9LFAQRbTJDPAxk,25288
phospy/science/datasets/builders/sample_metadata_normalizer.py,sha256=fPguNwvaBc_8cdsXh4exJ39Ak34AlWLtCDkECkRm_MM,1363
phospy/science/datasets/builders/sequence_derivation.py,sha256=phg5U6M3k4BVPe6OszcqMdFUsVdmJgAzaXhfPJOF70k,15707
phospy/science/datasets/builders/site_identity_derivation.py,sha256=dS7CrU4kOev9fdpBGGG9gMUlV_L7zsILjhK69XgqAxo,10123
phospy/science/datasets/builders/site_metadata_normalizer.py,sha256=o4CGmtbeZqJH_UlF8ABwGM-X_u8gXjOUPQiTxd3VH14,14014
phospy/science/datasets/builders/site_sequence_boundary.py,sha256=TAtsKNV-NBhL2WrOvnEeNbRMVYa6eRW4c9oGE8OzEpQ,9325
phospy/science/datasets/builders/total_matrix_normalizer.py,sha256=J2BWPDHSNIcl-fvNmddRw9IcY6w97YEHOAx2tnP2GG0,1553
phospy/science/datasets/builders/transformation_resolver.py,sha256=XYNvMo35ZaPXOVnH0l-ZtvF7yP3Dwf1bT7V02risfPg,15990
phospy/science/datasets/builders/transformation_state.py,sha256=hWmOrffRRNxKJtiXpAq4D5HIcKFpQJ603sZ1UqdY9mc,17924
phospy/science/datasets/builders/validator.py,sha256=5v0Ck6KTFQNeiXVWU3fsm1SFQRRiH2MIR6S8ZEtG6ys,9497
phospy/science/datasets/preprocessing/__init__.py,sha256=fDWAsxBoCWjH5JvQfF-TPo5nA1Irob7J2sYCexwTmkE,4074
phospy/science/datasets/preprocessing/batch_correction.py,sha256=iCHK9kEai6weerD_0aGHfcPDNVVNozJAt3iPXFaKop0,17808
phospy/science/datasets/preprocessing/batch_correction_metadata.py,sha256=2D2eu1fzaj13tE2yc1TmMfsvN-gpK7Ee4rCN8NsNJWo,9016
phospy/science/datasets/preprocessing/diagnostics.py,sha256=tuEoNxoopvkQiwSf6r32XFNHbEpla9coojapQwBa75k,17101
phospy/science/datasets/preprocessing/models.py,sha256=SQILjtSeSoJWGdIZcIbIY35h7A14pvWN1Qbmg5RplW8,42346
phospy/science/datasets/preprocessing/pipeline.py,sha256=BR4jjO3phRV6CNMCNxmr1YcczkqQ1U9ie8zo3JjBrPA,18754
phospy/science/datasets/preprocessing/policy_models.py,sha256=v6MLWoSFDdZd8jhyay08wnaSi7PMr7yMmjBHh26sNhM,2361
phospy/science/datasets/preprocessing/protein_aware_alignment.py,sha256=fa_XtnEKDB8dBuDpBLPIzPngDpST7bEhTGrWWLJlcdM,16583
phospy/science/datasets/preprocessing/protein_aware_preparation.py,sha256=JnduEKaUtR_0G0PGoOXcuNtbKpTboDzlVvN5fTyO65E,41129
phospy/science/datasets/preprocessing/protein_mapping.py,sha256=FHTVS2XgCe5my_UDDM6CoBO03YG_HCZA-cMW2CbVd2Q,16790
phospy/science/datasets/preprocessing/provenance_adapter.py,sha256=Es5SwWPeSIvuApZgYQfqC7qJb19Oa9EwSsUIkLxjhqc,7776
phospy/science/datasets/preprocessing/report_rows.py,sha256=J1jy98hQ7ZsyAYrWcLB3YnPdd9U896j96Pgv9uNJJjg,10041
phospy/science/datasets/preprocessing/report_schema.py,sha256=q3zLyRzESOpurLxZmXno0GHskydCBG-4B1EvMUpqpJo,13092
phospy/science/datasets/preprocessing/scientific_policies.py,sha256=pnR_1uSiBUDDOG4SLmVo9pU4LMBriooz1OTL1-07xf8,4263
phospy/science/datasets/preprocessing/stage_contract.py,sha256=ufcy-iNxFR63gT6L8kkYt5jI5rF3db3hkkyywAlyoFU,5763
phospy/science/datasets/preprocessing/stage_registry.py,sha256=uO3rBimyp508pUjQRyCl3L3oJbEZ5icnBjqIU3YE8Is,6445
phospy/science/datasets/preprocessing/state_builder.py,sha256=P9P64XxZPWILSaDl0Wy5_n2gA0owMSaOhkyCh-KQlEg,22410
phospy/science/datasets/preprocessing/site_sequence/__init__.py,sha256=nFmbPHCIOcVFEE3dLQejeU5D_67ymD0RYQM-jVGv4kU,1267
phospy/science/datasets/preprocessing/site_sequence/conflict_resolver.py,sha256=3fj8UE1f-OfDxSGYyYwI-yY3pX7kZZQlJ0evjIRbSkM,2770
phospy/science/datasets/preprocessing/site_sequence/diagnostics_builder.py,sha256=FgM87dM5bUA5AupCrEG3LZqyNAScWZqedrmK3XWbzdo,8849
phospy/science/datasets/preprocessing/site_sequence/metadata_updater.py,sha256=bcOJb4RzqVbC_i-ImP50zRGZOFXktGTzPpkPUqV9xrI,885
phospy/science/datasets/preprocessing/site_sequence/models.py,sha256=G7td8LvkcPtN5MV09gJstj3JJ6vtUaQRabe5FHtdMFw,1828
phospy/science/datasets/preprocessing/site_sequence/reference_loader.py,sha256=s1Y_aYgZ-F30AY9Twbu8saR2bEt8YGmW1hZkRKSViYA,2192
phospy/science/datasets/preprocessing/site_sequence/request_builder.py,sha256=HoZB7gDOvMw-19tpDNXmysH2nspfYR5gd1zi_dvgJDo,3940
phospy/science/datasets/preprocessing/stages/__init__.py,sha256=io_Nw6JWMlUlAXWWTBplUruTdYt2AhZSfYw96Dhs8HQ,1958
phospy/science/datasets/preprocessing/stages/batch_correction.py,sha256=WOKuFjczFV5-zOR2Mv6t2NHGyexa1Ia_eNXsbTAJHnc,8018
phospy/science/datasets/preprocessing/stages/comparisons.py,sha256=n1738NoNHSePQuSDKGxroOYprLGFmS9a80PQqJccbuo,18090
phospy/science/datasets/preprocessing/stages/intensity_transform.py,sha256=vnH0JA67RqnOB3Zu2S5fjHYmncLTerKny1wLNgz_IKQ,5111
phospy/science/datasets/preprocessing/stages/localisation.py,sha256=F5Usm8kZBDeducAbYWYQu-0SRK_eoJIJNvf1Jzib9aE,13505
phospy/science/datasets/preprocessing/stages/normalisation.py,sha256=E-VfF7W8iNh_KcJOMqsSoy2k5Q1KKP2hijrJrgrkX8k,13493
phospy/science/datasets/preprocessing/stages/site_matrix.py,sha256=yKOvWYtPJgpeRjT2NIN04qNQthm5IbvncHh57mPoOoc,21911
phospy/science/datasets/preprocessing/stages/site_sequence_resolution.py,sha256=RtGWFdT6EPpABjP_lklWwuiggWk6_OIJ-h72vVaxDSU,10107
phospy/science/datasets/preprocessing/stages/total_protein_correction.py,sha256=n7Ggfz5hOoZY1hDrb3uCB4SlbmXmuysLyHFzpOl-5aA,30160
phospy/science/datasets/preprocessing/stages/missing_data/__init__.py,sha256=gICaD5kp92XSdtF6CEsqwF5J0AMC08g1XsLtPyws_HE,196
phospy/science/datasets/preprocessing/stages/missing_data/audit.py,sha256=MsJQt9EjFKmdwcTgOs7NezttpUg9s3Y81VvtJAi9a5Y,10570
phospy/science/datasets/preprocessing/stages/missing_data/diagnostics.py,sha256=i2zghyQaKlGhqeGVnFbl1UzskuzPRYJhBCUrmhN2Azw,5237
phospy/science/datasets/preprocessing/stages/missing_data/forbid.py,sha256=gmZkUHUYePzFlfHlkfOxY9butYcXJbX12OKlh-1KGkE,1697
phospy/science/datasets/preprocessing/stages/missing_data/knn.py,sha256=cPCTbuat2fRqNjelSsXApPSuq3Ts2ccr4LSW_LYDVk8,8697
phospy/science/datasets/preprocessing/stages/missing_data/minprob.py,sha256=v0mBuihszWcmdL6IXDpZBJ653UQEPBudTJfxPiO-QfU,10917
phospy/science/datasets/preprocessing/stages/missing_data/models.py,sha256=d5HePMzIIT4zKmQ02pUkq8rMFwrzPtLaU6NTxVvJSew,2861
phospy/science/datasets/preprocessing/stages/missing_data/row_median.py,sha256=68Ml4W92Yuy4XlLnrcl3NUlNoVzJP_LhjZnIjIJ__V8,3645
phospy/science/datasets/preprocessing/stages/missing_data/stage.py,sha256=o34XAyFVIpjzby4UTH8IchMUuhu6hYYkRA2ag-UBeQs,17394
phospy/science/datasets/preprocessing/stages/site_matrix_components/__init__.py,sha256=5CrD5sk7xBQw0sq6dcyK3HExOZGtD-WGyOxhzGfBjHw,1141
phospy/science/datasets/preprocessing/stages/site_matrix_components/audit.py,sha256=cNvR34FgKxjVqlH7VRnEA46V6J-jzb_veBsNbrkklCU,9632
phospy/science/datasets/preprocessing/stages/site_matrix_components/duplicates.py,sha256=LqwiCOiQL373BVuLtErNAomTAiO8iquykILzDzOpyz4,28112
phospy/science/datasets/preprocessing/stages/site_matrix_components/identity.py,sha256=ltpDFWbreNGO92NCagz6nOzDdJj3Z3ESsBdjulNkgE0,8855
phospy/science/datasets/preprocessing/stages/site_matrix_components/metadata.py,sha256=fKK9UcqugJ5UlxoetLDJFwS45Ags8jnoOVLiiUuSR3w,12651
phospy/science/design/__init__.py,sha256=84DDiowZjhGgFzY5ShPytUZAqgYK2dUq-h7EhVwPaoU,1358
phospy/science/design/matrix_builder.py,sha256=WDsvlH88ctTbwXV8aNMFGAgdtoEh0-mXujstYyayfSg,22963
phospy/science/design/models.py,sha256=fkLoOTtHvBIX8BcjeElHUCjxrlykYPkuSQywnpc48DE,15864
phospy/science/differential/__init__.py,sha256=HxaS2DMbQ-n2ufGQ3Ic_canLOcmoNbk3H6I2ddDXUWY,1252
phospy/science/differential/empirical_bayes.py,sha256=O9BtyT5bXr_l0azA_8htuy_vyArPJxnrANoDChW1IVk,11825
phospy/science/differential/executor.py,sha256=4P2s19wPyhWwAoO1YU03jv-meSCIzeuF1rTnrQMao1g,13108
phospy/science/differential/models.py,sha256=MtjpHvNHFNnT3vJ2l_Xdujr9ST7ARn7ilQKH2BPqVxc,59812
phospy/science/differential/multiple_testing.py,sha256=5QfbYLSn8UhsLrI8LlP_UAe3XgNODtMClQj_uF6yFm8,338
phospy/science/differential/policy_models.py,sha256=B245VJrutDocKVdgGq6HtyNbvMofOXIxWILdpqs2dfU,290
phospy/science/differential/public.py,sha256=UrVsICtcQnHjamGhLNUy3eYCPIwX7OaC4LMGGyGwXdI,1058
phospy/science/differential/validator.py,sha256=j-UGE9PEXihZ7RN7VWyfU2a3cQ0r5uYvln8mFmibjww,2232
phospy/science/differential/aggregation/__init__.py,sha256=Gbt94JOmHJ2RYy_BaEHESEciEezkj3yoUjOKvyt8f-E,909
phospy/science/differential/aggregation/executor.py,sha256=SSZ8gzhM5tj_PlB4evZTGiSkpj3Ovy7OFGbjwp_8YrY,17148
phospy/science/differential/aggregation/models.py,sha256=-Ebyo49LpZv7xMfd9uRsec5eblZDdw9FsEIxvCarr9Y,7068
phospy/science/differential/aggregation/public.py,sha256=04scV679bZFCGQwQ2cd30-yYkfLHXW1pkyhH5GzFAIg,1905
phospy/science/differential/aggregation/scientific_policies.py,sha256=Kgy1A66wxFkvOuAd8CvXqLlBxJGyJCuR64gmpKgMrNg,2091
phospy/science/enrichment/__init__.py,sha256=EteOh0k3fn5qpUM0wgYOH4K0E0s1r99d0xn2WFJp02Y,2702
phospy/science/enrichment/collections.py,sha256=Ty99F4KQMbPoKNgORe9nHpsoITHDYILGcznkOurnc0M,1383
phospy/science/enrichment/models.py,sha256=DdYrFQ7WyWJ3h6SdmPD-5sryq3o6tyG0JKG2xn0oOe4,28470
phospy/science/enrichment/ora.py,sha256=z9SYZr__dBG4vnp2npdAxRTjUVX9KLdD1lmvQJIJnNM,13308
phospy/science/evidence/__init__.py,sha256=HWwlirgRmBKMGmloUSqRN0YkiRBIUDW7rQqRcvjasM8,3815
phospy/science/evidence/dataset_resolution.py,sha256=bGrRQ81nK2tAabLua6Vz0RxI8qFpQ8lGL5PkLiIjVY0,15660
phospy/science/evidence/localisation.py,sha256=SsX9pYoSTOX05bQNpFNye4UJkuUmSbxf1g4891wnfp8,5031
phospy/science/evidence/models.py,sha256=W4mDq9JBOpMH1nyMkxf-V1CpI8mEPMSYZCZzDJK2TE0,32757
phospy/science/evidence/modified_peptides.py,sha256=bO7__jUdn71Uw8HeeSG-smaMg2nhGvHxbmvEOkXxroE,10075
phospy/science/evidence/multi_site.py,sha256=-z36aYBP0ANKounbZAyea5FYtnqf-9T82TECPJI7ei4,10310
phospy/science/prediction/__init__.py,sha256=2wh6GJ3WCqq_n5xyrAzKC6DMkR7VZQu9Mc2W8nnJCmU,284
phospy/science/prediction/candidates.py,sha256=70NTE_uIe7OE508GZsniXITgptc0XaBaxDeoO7eCHyQ,6523
phospy/science/prediction/execution.py,sha256=UKXVdxEUmf289_ttfdbH6wzCQ9t4SZJZr2QpIdDOJss,4273
phospy/science/prediction/internal_view.py,sha256=OoJly7vc1c8LxJhKteQs28jOcSGoNm7lyQzrNvjMlV0,1433
phospy/science/prediction/models.py,sha256=HuhMAv7cKVUJK7hUFRkOrceY5Jns9nMu-B9_k6FKqXY,39326
phospy/science/prediction/policies.py,sha256=MGEvTjRFeu73jl-KJojYRCPRCESpOf-94V2UJRCld-c,8416
phospy/science/prediction/sampling_core.py,sha256=AQAosMwcACGhOUrpGyUfajVz1NYaA2abpLTJxv0M60U,5792
phospy/science/prediction/sampling_runtime.py,sha256=_7tLn0BvBhsxvggHyOSBCl3fQwNJicE-2Kcfxbxu2rI,3176
phospy/science/prediction/scientific_policies.py,sha256=4BN5gnp9rbls8Sl2SjIo-JpYYS5VavvVYeRiE2IB7dw,9601
phospy/science/prediction/scoring.py,sha256=H_drtxPZa8i9QMrLYGoqSngA6pgYRlxNqXw6bDDIDZI,17849
phospy/science/prediction/sequence_validation.py,sha256=NpACdeGumxE57olDoWcJWkTzoED9LlL_jQWw_gxxaUk,17659
phospy/science/prediction/svm.py,sha256=nkyp8TOpAWDoFH04m_HWIfdXX4_y5jNj5Wpt2dl4EVQ,4479
phospy/science/prediction/motif_scoring/__init__.py,sha256=kFJmXeYIkUwsMLSK60Iyi1d9EF1ZkycGsbRusFOhjxY,2988
phospy/science/prediction/motif_scoring/frequency_matrices.py,sha256=JPTTIg023zxP6zwwyDWFJk9x-LqKh2Me80tBFxCOPsY,3320
phospy/science/prediction/motif_scoring/kinase_library.py,sha256=jwS_Eqi9K8wZUC18IJ1YBLcUKjEwBwC6P2rD_BUsRF0,43439
phospy/science/prediction/motif_scoring/library_validation.py,sha256=KSWUOybUcyA2d3elMnGIRIv-G6BH6O7kgOUP1d-1i24,12338
phospy/science/prediction/motif_scoring/models.py,sha256=pwys-g8t_CivgL0GmiEU324UJPN6dvxbR7PlqLXQwdw,14694
phospy/science/prediction/motif_scoring/scaling.py,sha256=zz5OzjoYhgkTKEPPCyyXQ3gb6kIvzPI53z2VsLUGV-I,941
phospy/science/prediction/motif_scoring/scoring.py,sha256=rnnlK7qFsRC5CGoeb6MaRjIMhuURPQCDN0UH3Jcfaak,9640
phospy/science/references/__init__.py,sha256=HO1XagoTwAfxVIWE3jv74FCxQfdB8jgeahnC1Rcb94I,1925
phospy/science/references/builder.py,sha256=FEhEndm90n_ds6xv3raT7mrKh-sB_L-oIslhcBRv7TU,19294
phospy/science/references/identifiers.py,sha256=gTwAHyv4lGUhSELA2zQ_KUQ7J9clgj0r45pUnPXK9BI,9937
phospy/science/references/kinase_library.py,sha256=qlpG7g4DhCG9ikQYJ4deEwAHPVwBmS0M0YHRltLxa8k,36032
phospy/science/references/models.py,sha256=vfIou78TzG16GoONHDFiKJ4s-xZeyckvi-bWkxw2Psw,11645
phospy/science/references/resolution.py,sha256=14fOn4netKfljvwznn5_FWc7cLE56Vy0F8UQ6mn-pFA,4861
phospy/science/references/resources.py,sha256=_EgoDWVMYtsa_JCg_e4Ic7isUq-a81WC6_XO2zPQSGs,25354
phospy/science/scoring/__init__.py,sha256=dq68xL6YGGylj0mK6tuU3aOnaYQwe7evLgOaZG2_zb8,171
phospy/science/scoring/policy_models.py,sha256=QOn2hpPgn4wtaoR0jlATyiC3Vzz78qrHC9DxyThXCu8,530
phospy/science/sequences/__init__.py,sha256=9XfEnFJ3ZBokCgzI8r-hYB0NiqPuoNz0K2eRAlO01pI,704
phospy/science/sequences/fasta.py,sha256=KwRj58DxZ0vjPSVTOaXlZpD5u5GIiN5-tdqA5lthmJk,5253
phospy/science/sequences/models.py,sha256=JHwvcgeW9U79cD0SiK6sJQPGoC4KAUJRjIzzG2h9-EM,835
phospy/science/sequences/repository.py,sha256=VGUxwQ50VtsmI74ZZ8e1_nRXhTgOWCNkDgY3_58TyiE,3568
phospy/science/sequences/resolver.py,sha256=SBd7DZCnB3jx28E0SsCXOqVzZOd15XDrb69JSMbXVl8,10586
phospy/science/sequences/validation.py,sha256=CUNxJY6gQgynGxtZXLfCT_trdTFCoaHpb4O2BGgAWr0,1792
phospy/science/signalomes/__init__.py,sha256=ozW_kj_m1A0cIUf_ujAd6mrjwEBR-o2QIqqCtAOSr2U,1330
phospy/science/signalomes/assignments.py,sha256=FZVQPLySom30Qo5V-hdgqnhx7KiDdSX7XTyejcb4MWc,24266
phospy/science/signalomes/constants.py,sha256=w2k9GjqGjzxqZsxZ1J9q8g7bnVJM7h-rhAt9X1YN-48,3771
phospy/science/signalomes/context.py,sha256=PeLfcmCsd4LpG2ECkgfGaEqs5AM1DvlX9DUzt2fGcSo,25779
phospy/science/signalomes/expanded.py,sha256=g8VNg0iJtJ11jFrvKLuHkmXrG1Yze3EMbMvyKxNGkhQ,18128
phospy/science/signalomes/models.py,sha256=NIJ5-uKY2WBH0I5DkD2hytG5czgdVOmuDAAyE9KK_f0,13774
phospy/science/signalomes/modules.py,sha256=TmU9Ut1Ug16m_GFe_6kalS11QJnaSaKzg9rfMVr8pmU,8738
phospy/science/signalomes/network.py,sha256=JMb4ZvkCWZ4lkVatMdKVAnNT0n0tg6QjktlAQj8kP8o,15304
phospy/science/signalomes/science.py,sha256=YBs5C29FlaULYf_loxcP345QOQipmI4M97HhmO_uweg,3397
phospy/science/signalomes/clustering/__init__.py,sha256=ngZQB1dHQ9Q6wRL6607F8AhtREKhso_aKhm__tA8gj8,9907
phospy/science/signalomes/clustering/backend_dispatch.py,sha256=76R5mVWIY5DY9AjwhE7VDNePvWKzhd_X9Lothf7XeRo,1835
phospy/science/signalomes/clustering/candidate_scoring.py,sha256=yDu0KLZ02gaY8yjlPH4G7ROGdVmdBn9szhP7Vfr3YmY,19958
phospy/science/signalomes/clustering/candidate_selection.py,sha256=UhqRC7tUf8YRF52JSm7I8bRRXfBoaICO7LyzM5JRd_Q,9729
phospy/science/signalomes/clustering/contracts.py,sha256=gmvLQHb6vcZ4kfe4Ivo0J8umpUawsYXzCDV1KycGKQU,1143
phospy/science/signalomes/clustering/diagnostic_schemas.py,sha256=AZ46Ble_d9CUsv3Gy-0y4Z4KGimysMERyVTZCOcKB3Q,20186
phospy/science/signalomes/clustering/diagnostics.py,sha256=3VU_PzWdh7bAN4OrO4_CeiDuUD-vRQhsuZplxfm_O8g,7222
phospy/science/signalomes/clustering/exact_python.py,sha256=e1U4bx1gnVfvSPg9-opCfSjgI4StUj_NYSnhOgL57nM,5695
phospy/science/signalomes/clustering/models.py,sha256=TRgQyVNrr6kYXgVOIqv6dafUKA1Kd-ocrI4QipiABoA,3382
phospy/science/signalomes/clustering/module_selection.py,sha256=re9QsRasILcMkVrUU2r9_yeIUBbkGE_QUmfYcvWTkwU,9829
phospy/science/signalomes/clustering/orchestration.py,sha256=9INKAQXQ8jg2SuAffc2JUTMJUU0UK9V02TdQCAlU7hQ,11184
phospy/science/signalomes/clustering/policies.py,sha256=ZmDHE2mVCCaxpK6KdTo7A-FeMrT98HW6gFW6XRlfvlg,7071
phospy/science/signalomes/clustering/protein_modules.py,sha256=t90HG1NbWupxYAl3L6wv5W50WlWM-T5vwFK6QQ3YdwA,1994
phospy/science/signalomes/clustering/protocol.py,sha256=1RKZ11wKWEUX0FpdeYGiqv9dzBfUWl-YmK4HAYsEqFM,288
phospy/science/signalomes/clustering/scale_guards.py,sha256=VE2nwVwJ04vJIdf2j16d9AlFJlh8GjLYkbnkQBz5LEU,2861
phospy/science/signalomes/clustering/scientific_policies.py,sha256=grSHDHFhesSXLGgfA0q9wi-4JCc-Q2yuEuxphGcx4kI,5895
phospy/science/signalomes/clustering/scipy_hierarchical.py,sha256=3je0j8SHxWDQKfEAKFhGleC9zmFOW0AVDxmtz25TTLs,1487
phospy/science/signalomes/clustering/scoring.py,sha256=_MOuVEv5dvtU2q8gdU_pXFAw7bt0bhF5iD3zTkVF478,3276
phospy/science/signalomes/clustering/selection.py,sha256=Sdbdzji-JGJiWknbp8F-hZxjzTUJW_YwPw9SWF3KddI,2361
phospy/science/signalomes/clustering/tree_building.py,sha256=aDRoeeHpgqxaC65Getv6DSC1hufx6YJx-eWgdrgET54,10082
phospy/science/signalomes/clustering/tree_engine_adapter.py,sha256=4Op_xSlrb0gibcwghUJDd9UGfPdj7fp12gyRg9tg7d0,4236
phospy/science/signalomes/clustering/validation.py,sha256=zsOIGy46sGbnDMLfPaQKe6Q9YoM4PQy_lrrDma98Y2o,3703
phospy/science/signalomes/clustering/backends/__init__.py,sha256=di105O6EDGJA3mJRpEtCf-HiGpwxdAA0ugrqNdGgCMo,1399
phospy/science/signalomes/clustering/backends/exact_python.py,sha256=L5f-4l9R_Zglp5sEJ5PPjGy9taSpKIKNFfrv_r0hxM4,7597
phospy/science/signalomes/clustering/backends/scipy_hierarchical.py,sha256=9n02iXyrcGIXzQZC4aTOCjt7qvWUVg_NPB3VBda_5LU,4786
phospy/science/sites/__init__.py,sha256=ywA57Yy-H3FxTGOBGuiwumwglw2uF1Ck2k1AUpFbFc4,2166
phospy/science/sites/identifiers.py,sha256=nV37jmRnb36N0-sT_5cyCg9aoEEkMAgg86H_LI5xo2s,9146
phospy/science/sites/identity.py,sha256=VbWfzikcxN01CRP0RNTCPHK62JEnXX22DGt5evfvLss,13575
phospy/science/sites/site_keys.py,sha256=n8yRHmvNu4qE7-iJjVXnww9dZdbI_HoGMc8BdK25q4g,7009
phospy/science/sites/validation.py,sha256=b-rDAXwKJTbxDhEtdulT-Domh77ZggeNM2VfQJOLs5A,11799
phospy/science/statistics/__init__.py,sha256=1EGip4bLniMABLEHthCLrlC1aTTRFoNXntgegKgjPxY,561
phospy/science/statistics/multiple_testing.py,sha256=pb6DhDzp9ITgev9NhzxKXE0coOnqnosy-qJTBx5nlUs,3889
phospy/science/transformations/__init__.py,sha256=gdbS08l0LuePmsMrC7vICDM72cchLaGff9zxVy7Pt_Q,569
phospy/science/transformations/_authority.py,sha256=HNVUyZab6ax_srgcaOY3Ineva5lNdwrJiwkIqKwM6h8,2619
phospy/science/transformations/contracts.py,sha256=tYupumCmFtsBcw1SwwnYpjokrCPw2ChiJdZ7EeCMAsk,1498
phospy/science/transformations/models.py,sha256=huOpXJY7MWwWv6n7Xs08rafEPGWy4osiBNxbyajrmPo,20400
phospy/science/transformations/transformers/__init__.py,sha256=Mfx9_f-buWkjRV6Np6-sCtrlNaektJn5myR6dzA-J_s,252
phospy/science/transformations/transformers/identity.py,sha256=ObS_HCh5GiTmFNjW-AIiYqcay0YsW1nVa3GN-TLwPs8,819
phospy/science/transformations/transformers/log2.py,sha256=S8Nz4c-D837AedP5nOs4TtlzHQEmyKVADAcZXV8A1VY,5738
phospy/tables/__init__.py,sha256=2arrV4eT7OnzXH1mVEZulTURJsHMg8w9kKDkHfsj1zk,1329
phospy/tables/activity.py,sha256=D9Px2Ugh8yhaaMcSGUXKdwwqj3x7Xk4hscOwn6-ox-U,17251
phospy/tables/base.py,sha256=KHpHvnMN7wbPoqSDTO62Ytim6Ba7dhO_z6g559RAntg,3105
phospy/tables/datasets.py,sha256=XPr9TybGj77ajuLWhoGLyFt3txUDEUd3KTa2I0786uE,11572
phospy/tables/kinase.py,sha256=MqQkkkOzk5lVU_qN2OgmXCaj1sq8xZEIaMEyOrdqVX4,4844
phospy/tables/references.py,sha256=3lQILCh8XenmRxGG61PI0xyxG56viFec06GG-AIArnw,25960
phospy/tables/signalome/__init__.py,sha256=n2-MDBv6yiAofj25bBVNmVGe2ks8TNTI1yvwOnC6NsM,695
phospy/tables/signalome/assignments.py,sha256=ZbLryZMjof1Htpkhc4Ti9N3b1syoylCtVZsJuv6m7Xk,11260
phospy/tables/signalome/common.py,sha256=Z1Webwgn3tpECl4-Tik_4kB_f0VEjNUojw0vQCEfq2E,5865
phospy/tables/signalome/context.py,sha256=2KJROYuiTHt0LBBJn0BNqG0_ecd_btU-NW7AAwqAG-M,12117
phospy/tables/signalome/modules.py,sha256=-WAlKRaiH-_diZ86qN7yo4qlIimJQpC8Y8h0lJ3zu3A,2926
phospy/tables/signalome/network.py,sha256=kkzOkUft17kVVrf5WPPAFy6c0HBGAxM-zzmetLy7OBQ,10041
phospy/validation/__init__.py,sha256=bopDKoodo5tx5VAnrVkDYdqAywHEmv8qOcgFS-L5Rdc,74
phospy/validation/identity_contracts.py,sha256=HwxbreMzathsR5L-sPf0hbVluQyhL0ZqjjqReZJ7278,34797
phospy/validation/ownership.py,sha256=XCUngzxpnDjDbykZRWdL-gFoosSCKof5jxto_kbuLrg,2137
phospy/validation/common/__init__.py,sha256=16c4ZbMRImyJhdVCjgmjvxyXeKeAUkGmU-6v1BwHY6o,69
phospy/validation/common/config_values.py,sha256=UlGq7OuxkVqC4gW8KrRsWkn0gC3JHZZ4U3GVto00kYc,2629
phospy/validation/common/dataframes.py,sha256=CSkT0D6jXp8pson7KqSrErp3OoWxPW6amZIuXHlre4c,16231
phospy/validation/common/missing_values.py,sha256=jg5qudti-fhB7dqjeeIx10MT1xyvsbQ6Zqxx4tfcoeU,1833
phospy/validation/common/numbers.py,sha256=jBUbCj6OuO-quRNDqy4Xz_Zy8kKhhPomlrzBMHYv0Lo,2713
phospy/validation/common/numeric_frames.py,sha256=UdETvwYTFLk3-a9yAWboC_sc-P2UrijrLmUVT3Mgb0A,2360
phospy/validation/common/paths.py,sha256=nSqdXwrKjinhgvrXhc7qu39t8JimbDcwGy_2tpxTAho,781
phospy/validation/configs/__init__.py,sha256=0_t3wAqfUUDI-sjGb2zTO_RazE1nE1y5mKAmiqKfF7I,58
phospy/validation/configs/preprocessing.py,sha256=uA1VDlSVvrPd5D_w7i3kltKnw0tsa4Clok2xLE2WGjc,30634
phospy/validation/datasets/__init__.py,sha256=g5yKQMqYCuozcmBCw5LY0zP4sr6w2G-s_2JyHLTdMeA,4271
phospy/validation/datasets/analysis_ready.py,sha256=2adGCCNS9yD7J45dFh3qBOnhjJ_tKBxUNl-4bQEj6A0,1902
phospy/validation/datasets/batch_correction.py,sha256=FOfq4aBD1WMwZFkKffdo9lFu4b1h1iKA-UWlKxxrHZ4,10313
phospy/validation/datasets/display_site_identity.py,sha256=YWJxQwXuC8ygc5cMcJUbKoGFII5pQoXKDRhCbH8ucQc,5141
phospy/validation/datasets/fragpipe.py,sha256=XgNUtIuhnHcdux-HHCqRhtscUg13gWRKvJs9bYT7rh8,2275
phospy/validation/datasets/importers.py,sha256=8ydkVpiDsQEeew-N6aLOz2YGYVGMUsYiLCOF2TtQRPg,10760
phospy/validation/datasets/inputs.py,sha256=DJjTNgHKJNGhJi9qU0vNaX1lD2Uzu7fU6AurDyajTcw,1359
phospy/validation/datasets/maxquant.py,sha256=Jxo77LXiVC4xc62vH1mXT4_yNQ-D0lsvhB1wjAjDxgU,1325
phospy/validation/datasets/preprocessing.py,sha256=9XJKHrlPd0YPKBObXuXYX2CrhXNwbraqF5uyZC8isfU,6286
phospy/validation/datasets/protein_scoped_site_identity.py,sha256=LvaJnxCdOgGQxGFYXqRFFuuzqc0bY9MtmHWJ1Gd3eIM,704
phospy/validation/datasets/site_metadata.py,sha256=X_JxJ7vPgi1RVqmOfiBtKjhk4t2fPt9xn5cC-1uR6MQ,28896
phospy/validation/references/__init__.py,sha256=AQq3wI01r1iQM2RGdIdv8QCKjqyut_zInDcwLjBhtLc,530
phospy/validation/references/builder.py,sha256=-f2B_LmvluDmVVzTOwq3_RR8MkPgm18wAiKbCW73BW8,7493
phospy/validation/references/bundle.py,sha256=rcNsD4SAAppdwZh3K229L74CDATSQZzUgI1ZjjAmhio,1650
phospy/validation/references/compatibility.py,sha256=Cz-3iz3qbFMiICXZC9LRIp9Ugve9Iz4MtXquhwSAgFQ,2742
phospy/validation/references/kinase_library.py,sha256=jZLF6jvRIb77-IR5nRMxRV8I19eNiq0hLF8DV_CbF74,7250
phospy/validation/transformations/__init__.py,sha256=EYo62TBOfxWpMVlxgaYN-XSYKp0HetYdeC33z1UHZoo,40
phospy/validation/transformations/state.py,sha256=ZxEnUtdRnZ0yQNQb57PzrBKacJvvhFus4nLUL2HjVSo,1943
phospy/validation/workflows/__init__.py,sha256=bGdns0IBc6A-YYzO7wOhFEKyJxcu7NA3PFh2DKzkMFg,43
phospy/validation/workflows/activity.py,sha256=DHicpBdOdqU7rfBYRJptZVqRUHTLfiBVM-zCXv6EAzA,6270
phospy/validation/workflows/configs.py,sha256=TNsvwxLZU4TIGCtIL6mCcN1haJIIC4Cc-vsD-yt-UyY,4038
phospy/validation/workflows/differential.py,sha256=hePw07ksqbmnUy2UzpZgiFpbSHxgDtYViHa8pjdVmOo,30437
phospy/validation/workflows/enrichment.py,sha256=gaYnrKb_1iU0askMMLG2A2XgxouNsSHF9Ocz4u6PKBE,11891
phospy/validation/workflows/identity.py,sha256=HWoAakovAqcc6a0dyCK6aWpYbz9YbBNkycH7peuWqcs,3336
phospy/workflows/__init__.py,sha256=_5ygLUi8kk36eciAITA-5yBzsYYO4XviP7IMGvKQnhI,493
phospy/workflows/differential/__init__.py,sha256=CPFXdA4pgqFPs_4qzXL_e4GJVkn4i7lA7IVeT7GAJSA,170
phospy/workflows/differential/executor.py,sha256=WS1L4ILmajPtWHkTFmXgAi_a0-ccI8PRfiTH0otBsGc,14414
phospy/workflows/differential/interpreter.py,sha256=8I0L8HHnizEannOz0NewBSdeY62Tv7e-UPPGGKUxyBE,37219
phospy/workflows/differential/models.py,sha256=qSdSroxiajOevfdOFl3o-WHxnJxyak_EpRjfShtqq44,8364
phospy/workflows/differential/provenance.py,sha256=_dkr29Pm7nHNJC-6bHDU9JYTHa8Ky96BDnUMqOiv6Uk,15954
phospy/workflows/differential/public.py,sha256=MvOjwyI5huX8kzByl-2en5r23okWQQ6jxMGMvDXzkmY,1609
phospy/workflows/differential/replicates.py,sha256=5-ffdEsrt7q_ysqS2QnnTzP65yKC0PmHM6goyy-z-Js,19546
phospy/workflows/differential/validator.py,sha256=qSny3HZflvJmvxODhVxjb7D8yRUjt0J2sYnDCO0CJgk,7011
phospy/workflows/enrichment/__init__.py,sha256=hLx9sPQieTrDCXimvfRRdL1l3r5VtqpE3oc6pm05Xhc,148
phospy/workflows/enrichment/executor.py,sha256=sAjN848cxr9W_APJ7ew83d3O8anUwXIf5eYh9CFJNos,13799
phospy/workflows/enrichment/interpreter.py,sha256=tXhClMEqIsY1s4EUHOvNeKaJjWGQYrFbeI05Y_FV-Cw,4893
phospy/workflows/enrichment/models.py,sha256=7zorPHO6BLSKb5qXd06ufMyL-YmnANxXZqHFCt4_Jhk,3872
phospy/workflows/enrichment/public.py,sha256=hLx9sPQieTrDCXimvfRRdL1l3r5VtqpE3oc6pm05Xhc,148
phospy/workflows/enrichment/validator.py,sha256=tx43qSNM6dmtwjbyKFrIbnhL_j2IP5bgUENMxgrCiVI,1307
phospy/workflows/enrichment/workflow.py,sha256=XHLln5trOAMNml2gEqrkTQ5D0obYwbGIMuuYXPcE3EI,1522
phospy/workflows/kinase/__init__.py,sha256=PTH-w7NSsO2iM53ApOx3-Chub4rFdaH3aZo1A9OTkUU,130
phospy/workflows/kinase/activity_runner.py,sha256=8ruIRuh41bVEsJHboKeGF0i4-2-Q4Hqfe-rVmXDzQ90,7972
phospy/workflows/kinase/component_models.py,sha256=4rR7taFg4PjqCjEloSD4blHYtkKgtCoqoREHw7DEkhI,1184
phospy/workflows/kinase/contracts.py,sha256=CMz4PLX3p_E0grM1Y01-mfyCBPNQCx_bTUwWNL0bcn0,21712
phospy/workflows/kinase/eligibility.py,sha256=9wrP_3kRfC2QeEsmnLNo0FH1iW5TpGF9NVloEBb_o8o,4137
phospy/workflows/kinase/executor.py,sha256=AtEVP5NswUp1YRAsWnrRwxAABMrzQxbG9z3IrxrrezE,6915
phospy/workflows/kinase/interpreter.py,sha256=9Tj6zj92HnzpeEYET8IM7__8JcmY0qqSLnxjAjKRu-w,23406
phospy/workflows/kinase/kinase_library_scoring.py,sha256=2QpqTNaKLGzfPLW5eiSI9GmHz7tvDYEAUwNyjydGcvc,3073
phospy/workflows/kinase/prediction_runner.py,sha256=hAhFWw_YvAlvHqkIFSH5poKhxW1LWcm9OquWoESS_RI,14187
phospy/workflows/kinase/provenance.py,sha256=4MppVrvj58hM87RRFNaDS9z4hBFa5cFIiD0B58oupus,23892
phospy/workflows/kinase/public.py,sha256=bCuWemh_1TvAbedgO-HCO6AbUGHAjK-F0LUUbEADbDI,1394
phospy/workflows/kinase/reference_projection.py,sha256=VgzXL8nnhCUP2AsGZ-s-FdTmpWtyIED3xRVWczUDU2s,11336
phospy/workflows/kinase/result_assembly.py,sha256=3jIJqzT0N-DFP8KWqFQ5iwHLkvjwB7RSx7m9ivwWBCE,1482
phospy/workflows/kinase/science.py,sha256=WPq_EQNsAMK2mX7WC2bonXOuImTt7NPkyUKyZhF4dlk,13801
phospy/workflows/kinase/scoring_runner.py,sha256=sO4hHsYX5ZVGVV2aI1YAbus7hKdafJPN2Vw7BxENTS8,16683
phospy/workflows/kinase/scoring_transforms.py,sha256=Fr0NAElJodgpOFKGo5hFajpRMQVCvOfML9WuJvoK-E4,469
phospy/workflows/kinase/site_attrition.py,sha256=m4KmOTr6jQSyiAe196_N9md29vCUnwTndMuSztmMda8,8960
phospy/workflows/kinase/site_sequence_support.py,sha256=zgNYo-KmfJxQGfAc0nFh3DhR2bid0KPC-Q11pwdFQmc,10050
phospy/workflows/kinase/validator.py,sha256=GIPDSbY-4P61i_9z0uO8AQ8HNRxH6CpD0AL_0AMzLU8,4911
phospy/workflows/signalome/__init__.py,sha256=yLRV-i7SyXyRYnCUS5YIXACBbbFfzSCZlS5PEbFL_dA,142
phospy/workflows/signalome/alignment_diagnostics.py,sha256=23buQ3sFma2eDPaB00LdyJ1sXbGRgSaob7yoyrfw24k,7742
phospy/workflows/signalome/boundary_errors.py,sha256=mXnGkVO0Ccolcr6kM1bR1wPo606GDxtxgRvv7LootSo,1619
phospy/workflows/signalome/clustering_runner.py,sha256=Ssx3YmFAlMtbaiPRKM6r2frtfz-ap41MVpqnZWvNqjs,13358
phospy/workflows/signalome/component_helpers.py,sha256=nSp229SJ59jfA61ihQN7xaEkqt-fe5JyI8IZ6Ut57V8,2862
phospy/workflows/signalome/component_models.py,sha256=d57EY4MaHoQLefFM3ecwZJULxyUN7H61Se0xiH0azFQ,4647
phospy/workflows/signalome/constants.py,sha256=H9Yguz4bRB0Zkb7nG6d6jTNdOih76ll9wuciOiq-_CU,1576
phospy/workflows/signalome/context_tables.py,sha256=wLbvI7kp0lsGeddy9iFGTfEsZCFx2GWWjpNvYzGmJLM,3815
phospy/workflows/signalome/contracts.py,sha256=i5eX3QnYk9-sVzOtnpqqKaKKDfFHtXoyWwYYQWxT2JE,7969
phospy/workflows/signalome/executor.py,sha256=F7ctPWpTw-GxEsaIKg2KEcgCIn8JSBQGcWOJOf6Dcd8,7347
phospy/workflows/signalome/interpreter.py,sha256=8L9hYUdzjrjjC8CYB0wntfFECJZPFYBIZjWMx1HHiAA,15797
phospy/workflows/signalome/matrix_alignment.py,sha256=jb_jAWbsFyCbIy1HngiolceGNoK0IIkfoB-xIPXtIdg,11971
phospy/workflows/signalome/module_tables.py,sha256=Uy-0IPMKNBpqP9dZb1Z9uHLG3LoWF0FznHrFF8f9KME,8064
phospy/workflows/signalome/network_builder.py,sha256=wXHgPLQe0I_2Ft-cTgZl8azsB4fERX9ShiXl4NQD-EM,5425
phospy/workflows/signalome/protein_resolution.py,sha256=_6ceLC6GYNKBh-CVXz3cP8OqCFYuB10QEcgaQYxJNQk,4405
phospy/workflows/signalome/provenance.py,sha256=EbReR4DCYudqRwpOMGR0vnWOUYEn5arKobAR4biFRUI,31790
phospy/workflows/signalome/public.py,sha256=SwBnHUgsXSG4nyZQ7rQ1df-fPFqBjC7EhqdlK2U2BNg,1466
phospy/workflows/signalome/result_assembly.py,sha256=ic6z5C8Dj4tarch-Xr9bEAgWnUkHjvfFALlE6eGNe3g,4686
phospy/workflows/signalome/scientific_policies.py,sha256=Z1WT0iQXU5GnVaM9OAPh_Xa8hvT26wO68xm7hgKADsY,5440
phospy/workflows/signalome/score_matrix_selection.py,sha256=zobFURiQNkqNoMyNhdmphC9XepgQKC3xTs2sCq0K4RY,2912
phospy/workflows/signalome/score_preconditioning.py,sha256=QHgM7mKTvWJfldGXJwbdfje7o0GuYj-jt312TA7uxUg,6402
phospy/workflows/signalome/validator.py,sha256=PWeUN6K1NOlasTbHpHM8s__LJYzd-fMGpToHuf3Z4Oc,11074
phospy-1.6.0.dist-info/licenses/LICENSE,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149
phospy-1.6.0.dist-info/licenses/NOTICE.md,sha256=fn5nCfaTNTiJNDBewPJ6gOBft02z85Fc-fw3YQRjP1Q,2294
phospy-1.6.0.dist-info/METADATA,sha256=gLM2ufWZhPcw_GsvIrwltPDpPsHwCNDs4nq2HqrMW88,11037
phospy-1.6.0.dist-info/WHEEL,sha256=1tXe9gY0PYatrMPMDd6jXqjfpz_B-Wqm32CPfRC58XU,91
phospy-1.6.0.dist-info/top_level.txt,sha256=sYUTSySvwRUVBS5nyWMHzlTulPhiKj39tNaeDQcMFow,7
phospy-1.6.0.dist-info/RECORD,,
