ID | Name | # APs | Orientations (O / SO / U) | NC | OC / OSC | IC / ISC | MAP |
---|---|---|---|---|---|---|---|
A1 | scaffmatch | 53 | 53 / 0 / 0 | 48 | 5 / 0 | 0 / 0 | 51 (96.23 %) |
A2 | sga | 43 | 43 / 0 / 0 | 40 | 3 / 0 | 0 / 0 | 42 (97.67 %) |
A3 | soap2 | 54 | 54 / 0 / 0 | 49 | 5 / 0 | 0 / 0 | 52 (96.30 %) |
A4 | sspace | 51 | 51 / 0 / 0 | 48 | 3 / 0 | 0 / 0 | 49 (96.08 %) |
ID | Name | # APs | Orientations (O / SO / U) | NC | OC / OSC | IC / ISC | MAP |
Seq1 | Seq2 | Or1 | Or2 | Or | ISC | IC | OSC | OC | Unique | MAP |
---|---|---|---|---|---|---|---|---|---|---|
contig_23 | contig_4 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_56 | contig_57 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_39 | contig_42 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_43 | contig_44 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_42 | contig_58 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_16 | contig_17 | + | + | O | 0 | 0 | 0 | 1 | 0 | 1 |
contig_38 | contig_60 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_54 | contig_59 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_1 | contig_56 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_17 | contig_55 | + | + | O | 0 | 0 | 0 | 1 | 1 | 0 |
contig_36 | contig_60 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_13 | contig_26 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_2 | contig_21 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_16 | contig_51 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_0 | contig_5 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_29 | contig_58 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_15 | contig_66 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_21 | contig_22 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_12 | contig_27 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_2 | contig_5 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_43 | contig_46 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_35 | contig_37 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_53 | contig_8 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_19 | contig_7 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_48 | contig_63 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_30 | contig_53 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_46 | contig_47 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_14 | contig_62 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_25 | contig_26 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_32 | contig_34 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_55 | contig_64 | + | + | O | 0 | 0 | 0 | 1 | 1 | 0 |
contig_20 | contig_27 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_25 | contig_65 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_23 | contig_40 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_20 | contig_65 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_33 | contig_59 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_7 | contig_8 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_13 | contig_3 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_36 | contig_61 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_1 | contig_50 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_15 | contig_49 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_18 | contig_4 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_3 | contig_34 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_40 | contig_66 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_35 | contig_39 | - | - | O | 0 | 0 | 0 | 1 | 0 | 1 |
contig_18 | contig_19 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_32 | contig_33 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_12 | contig_22 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_54 | contig_64 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_0 | contig_48 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_41 | contig_61 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_37 | contig_38 | + | + | O | 0 | 0 | 0 | 1 | 0 | 1 |
contig_29 | contig_30 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
Seq1 | Seq2 | Or1 | Or2 | Or | ISC | IC | OSC | OC | Unique | MAP |
Seq1 | Seq2 | Or1 | Or2 | Or | ISC | IC | OSC | OC | Unique | MAP |
---|---|---|---|---|---|---|---|---|---|---|
contig_23 | contig_4 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_56 | contig_57 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_42 | contig_58 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_16 | contig_17 | + | + | O | 0 | 0 | 0 | 1 | 0 | 1 |
contig_54 | contig_59 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_1 | contig_56 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_36 | contig_60 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_13 | contig_26 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_2 | contig_21 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_16 | contig_51 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_0 | contig_5 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_15 | contig_66 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_21 | contig_22 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_12 | contig_27 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_2 | contig_5 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_53 | contig_8 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_19 | contig_7 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_48 | contig_63 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_30 | contig_53 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_14 | contig_62 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_25 | contig_26 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_32 | contig_34 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_20 | contig_27 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_25 | contig_65 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_17 | contig_64 | + | + | O | 0 | 0 | 0 | 1 | 0 | 1 |
contig_23 | contig_40 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_20 | contig_65 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_33 | contig_59 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_7 | contig_8 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_13 | contig_3 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_36 | contig_61 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_1 | contig_50 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_15 | contig_49 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_18 | contig_4 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_3 | contig_34 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_38 | contig_39 | - | - | O | 0 | 0 | 0 | 1 | 0 | 0 |
contig_40 | contig_66 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_18 | contig_19 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_32 | contig_33 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_12 | contig_22 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_54 | contig_64 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_0 | contig_48 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_41 | contig_61 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
Seq1 | Seq2 | Or1 | Or2 | Or | ISC | IC | OSC | OC | Unique | MAP |
Seq1 | Seq2 | Or1 | Or2 | Or | ISC | IC | OSC | OC | Unique | MAP |
---|---|---|---|---|---|---|---|---|---|---|
contig_17 | contig_55 | - | - | O | 0 | 0 | 0 | 1 | 1 | 0 |
contig_23 | contig_4 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_56 | contig_57 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_39 | contig_42 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_43 | contig_44 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_42 | contig_58 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_38 | contig_60 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_54 | contig_59 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_1 | contig_56 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_16 | contig_55 | + | + | O | 0 | 0 | 0 | 1 | 1 | 0 |
contig_36 | contig_60 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_13 | contig_26 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_2 | contig_21 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_16 | contig_51 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_0 | contig_5 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_29 | contig_58 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_15 | contig_66 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_21 | contig_22 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_12 | contig_27 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_2 | contig_5 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_43 | contig_46 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_35 | contig_37 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_53 | contig_8 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_19 | contig_7 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_48 | contig_63 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_30 | contig_53 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_46 | contig_47 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_14 | contig_62 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_25 | contig_26 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_32 | contig_34 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_20 | contig_27 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_25 | contig_65 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_44 | contig_45 | - | - | O | 0 | 0 | 0 | 0 | 1 | 1 |
contig_17 | contig_64 | + | + | O | 0 | 0 | 0 | 1 | 0 | 1 |
contig_23 | contig_40 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_20 | contig_65 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_33 | contig_59 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_7 | contig_8 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_13 | contig_3 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_36 | contig_61 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_1 | contig_50 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_15 | contig_49 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_18 | contig_4 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_3 | contig_34 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_40 | contig_66 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_35 | contig_39 | - | - | O | 0 | 0 | 0 | 1 | 0 | 1 |
contig_18 | contig_19 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_32 | contig_33 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_12 | contig_22 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_54 | contig_64 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_0 | contig_48 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_41 | contig_61 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_37 | contig_38 | + | + | O | 0 | 0 | 0 | 1 | 0 | 1 |
contig_29 | contig_30 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
Seq1 | Seq2 | Or1 | Or2 | Or | ISC | IC | OSC | OC | Unique | MAP |
Seq1 | Seq2 | Or1 | Or2 | Or | ISC | IC | OSC | OC | Unique | MAP |
---|---|---|---|---|---|---|---|---|---|---|
contig_23 | contig_4 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_56 | contig_57 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_39 | contig_42 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_43 | contig_44 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_42 | contig_58 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_16 | contig_17 | + | + | O | 0 | 0 | 0 | 1 | 0 | 1 |
contig_38 | contig_60 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_54 | contig_59 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_1 | contig_56 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_36 | contig_60 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_13 | contig_26 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_2 | contig_21 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_16 | contig_51 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_0 | contig_5 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_29 | contig_58 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_15 | contig_66 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_21 | contig_22 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_12 | contig_27 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_2 | contig_5 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_43 | contig_46 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_53 | contig_8 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_19 | contig_7 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_48 | contig_63 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_30 | contig_53 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_46 | contig_47 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_14 | contig_62 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_25 | contig_26 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_32 | contig_34 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_20 | contig_27 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_25 | contig_65 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_45 | contig_47 | - | - | O | 0 | 0 | 0 | 0 | 1 | 0 |
contig_17 | contig_64 | + | + | O | 0 | 0 | 0 | 1 | 0 | 1 |
contig_23 | contig_40 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_20 | contig_65 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_33 | contig_59 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_7 | contig_8 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_13 | contig_3 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_36 | contig_61 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_1 | contig_50 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_15 | contig_49 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_18 | contig_4 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_3 | contig_34 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_38 | contig_39 | - | - | O | 0 | 0 | 0 | 1 | 0 | 0 |
contig_40 | contig_66 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_18 | contig_19 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_32 | contig_33 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_12 | contig_22 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_54 | contig_64 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_0 | contig_48 | + | + | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_41 | contig_61 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
contig_29 | contig_30 | - | - | O | 0 | 0 | 0 | 0 | 0 | 1 |
Seq1 | Seq2 | Or1 | Or2 | Or | ISC | IC | OSC | OC | Unique | MAP |
[ scaffmatch (A1); sga (A2); soap2 (A3); sspace (A4) ]
Fragment length filtration is not available, as no data regarding fragments length was provided
Sources | Seq1 | Seq2 | OOr1 | OOr2 | POr1 | POr2 | Or1 | Or2 | CW | Or | ISC | IC | ISC | OC | MAP | self_id |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
[A3] | contig_17 | contig_55 | - | - | None | None | - | - | 1.0 | O | 0 | 0 | 0 | [A1, A2, A4] | 0 | m_0 |
[A1, A2, A3, A4] | contig_23 | contig_4 | + | + | + | + | + | + | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_1 |
[A1, A2, A3, A4] | contig_56 | contig_57 | + | + | + | + | + | + | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_2 |
[A1, A3, A4] | contig_39 | contig_42 | - | - | - | - | - | - | 3.0 | O | 0 | 0 | 0 | 0 | 1 | m_3 |
[A1, A3, A4] | contig_43 | contig_44 | - | - | - | - | - | - | 3.0 | O | 0 | 0 | 0 | 0 | 1 | m_4 |
[A1, A2, A3, A4] | contig_42 | contig_58 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_5 |
[A1, A2, A4] | contig_16 | contig_17 | + | + | + | + | + | + | 3.0 | O | 0 | 0 | 0 | [A3] | 1 | m_6 |
[A1, A3, A4] | contig_38 | contig_60 | + | + | + | + | + | + | 3.0 | O | 0 | 0 | 0 | 0 | 1 | m_7 |
[A1, A2, A3, A4] | contig_54 | contig_59 | + | + | + | + | + | + | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_8 |
[A1, A2, A3, A4] | contig_1 | contig_56 | + | + | + | + | + | + | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_9 |
[A3] | contig_16 | contig_55 | + | + | None | None | + | + | 1.0 | O | 0 | 0 | 0 | [A1, A2, A4] | 0 | m_10 |
[A1] | contig_17 | contig_55 | + | + | None | None | + | + | 1.0 | O | 0 | 0 | 0 | [A2, A3, A4] | 0 | m_11 |
[A1, A2, A3, A4] | contig_36 | contig_60 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_12 |
[A1, A2, A3, A4] | contig_13 | contig_26 | + | + | + | + | + | + | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_13 |
[A1, A2, A3, A4] | contig_2 | contig_21 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_14 |
[A1, A2, A3, A4] | contig_16 | contig_51 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_15 |
[A1, A2, A3, A4] | contig_0 | contig_5 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_16 |
[A1, A3, A4] | contig_29 | contig_58 | + | + | + | + | + | + | 3.0 | O | 0 | 0 | 0 | 0 | 1 | m_17 |
[A1, A2, A3, A4] | contig_15 | contig_66 | + | + | + | + | + | + | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_18 |
[A1, A2, A3, A4] | contig_21 | contig_22 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_19 |
[A1, A2, A3, A4] | contig_12 | contig_27 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_20 |
[A1, A2, A3, A4] | contig_2 | contig_5 | + | + | + | + | + | + | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_21 |
[A1, A3, A4] | contig_43 | contig_46 | + | + | + | + | + | + | 3.0 | O | 0 | 0 | 0 | 0 | 1 | m_22 |
[A1, A3] | contig_35 | contig_37 | + | + | + | + | + | + | 2.0 | O | 0 | 0 | 0 | 0 | 1 | m_23 |
[A1, A2, A3, A4] | contig_53 | contig_8 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_24 |
[A1, A2, A3, A4] | contig_19 | contig_7 | + | + | + | + | + | + | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_25 |
[A1, A2, A3, A4] | contig_48 | contig_63 | + | + | + | + | + | + | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_26 |
[A1, A2, A3, A4] | contig_30 | contig_53 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_27 |
[A1, A3, A4] | contig_46 | contig_47 | + | + | + | + | + | + | 3.0 | O | 0 | 0 | 0 | 0 | 1 | m_28 |
[A1, A2, A3, A4] | contig_14 | contig_62 | + | + | + | + | + | + | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_29 |
[A1, A2, A3, A4] | contig_25 | contig_26 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_30 |
[A1, A2, A3, A4] | contig_32 | contig_34 | + | + | + | + | + | + | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_31 |
[A1] | contig_55 | contig_64 | + | + | None | None | + | + | 1.0 | O | 0 | 0 | 0 | [A2, A3, A4] | 0 | m_32 |
[A1, A2, A3, A4] | contig_20 | contig_27 | + | + | + | + | + | + | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_33 |
[A1, A2, A3, A4] | contig_25 | contig_65 | + | + | + | + | + | + | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_34 |
[A4] | contig_45 | contig_47 | - | - | None | None | - | - | 1.0 | O | 0 | 0 | 0 | 0 | 0 | m_35 |
[A3] | contig_44 | contig_45 | - | - | - | - | - | - | 1.0 | O | 0 | 0 | 0 | 0 | 1 | m_36 |
[A2, A3, A4] | contig_17 | contig_64 | + | + | + | + | + | + | 3.0 | O | 0 | 0 | 0 | [A1] | 1 | m_37 |
[A1, A2, A3, A4] | contig_23 | contig_40 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_38 |
[A1, A2, A3, A4] | contig_20 | contig_65 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_39 |
[A1, A2, A3, A4] | contig_33 | contig_59 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_40 |
[A1, A2, A3, A4] | contig_7 | contig_8 | + | + | + | + | + | + | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_41 |
[A1, A2, A3, A4] | contig_13 | contig_3 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_42 |
[A1, A2, A3, A4] | contig_36 | contig_61 | + | + | + | + | + | + | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_43 |
[A1, A2, A3, A4] | contig_1 | contig_50 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_44 |
[A1, A2, A3, A4] | contig_15 | contig_49 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_45 |
[A1, A2, A3, A4] | contig_18 | contig_4 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_46 |
[A1, A2, A3, A4] | contig_3 | contig_34 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_47 |
[A2, A4] | contig_38 | contig_39 | - | - | None | None | - | - | 2.0 | O | 0 | 0 | 0 | [A1, A3] | 0 | m_48 |
[A1, A2, A3, A4] | contig_40 | contig_66 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_49 |
[A1, A3] | contig_35 | contig_39 | - | - | - | - | - | - | 2.0 | O | 0 | 0 | 0 | [A2, A4] | 1 | m_50 |
[A1, A2, A3, A4] | contig_18 | contig_19 | + | + | + | + | + | + | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_51 |
[A1, A2, A3, A4] | contig_32 | contig_33 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_52 |
[A1, A2, A3, A4] | contig_12 | contig_22 | + | + | + | + | + | + | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_53 |
[A1, A2, A3, A4] | contig_54 | contig_64 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_54 |
[A1, A2, A3, A4] | contig_0 | contig_48 | + | + | + | + | + | + | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_55 |
[A1, A2, A3, A4] | contig_41 | contig_61 | - | - | - | - | - | - | 4.0 | O | 0 | 0 | 0 | 0 | 1 | m_56 |
[A1, A3] | contig_37 | contig_38 | + | + | + | + | + | + | 2.0 | O | 0 | 0 | 0 | [A2, A4] | 1 | m_57 |
[A1, A3, A4] | contig_29 | contig_30 | - | - | - | - | - | - | 3.0 | O | 0 | 0 | 0 | 0 | 1 | m_58 |
Sources | Seq1 | Seq2 | OOr1 | OOr2 | POr1 | POr2 | Or1 | Or2 | CW | Or | ISC | IC | ISC | OC | MAP | self_id |
Dr. Max A. Alekseyev: maxal@gwu.edu
The project is supported by the National Science Foundation under Grant No. IIS-1462107.
2016