pandas>=1.5.0
numpy>=1.23.0
pydeseq2>=0.4.1
matplotlib>=3.7.1
seaborn>=0.12.2
gseapy>=1.0.5
scikit-learn>=1.2.0
statsmodels>=0.14.0
scipy>=1.10.0
GEOparse>=2.0.0

[dev]
pytest>=7.0
pytest-cov>=4.0
black>=23.0
flake8>=6.0
mypy>=1.0

[docs]
sphinx>=7.0
sphinx-rtd-theme>=1.3
nbsphinx>=0.9

[workflow]
snakemake>=7.25.0
