.coveragerc
.flake8
.gitignore
.pre-commit-config.yaml
LICENSE
README.rst
meta.yaml
notebook.ipynb
pyproject.toml
pytest.ini
.github/dependabot.yml
.github/workflows/deploy_PyPi.yml
.github/workflows/deploy_anaconda.yml
.github/workflows/deploy_coverage.yml
.github/workflows/deploy_documentation.yml
DeepPeak/__init__.py
DeepPeak/_version.py
DeepPeak/dataset.py
DeepPeak/directories.py
DeepPeak/peak_count.py
DeepPeak/processing.py
DeepPeak/signal_generator.py
DeepPeak/visualization.py
DeepPeak.egg-info/PKG-INFO
DeepPeak.egg-info/SOURCES.txt
DeepPeak.egg-info/dependency_links.txt
DeepPeak.egg-info/requires.txt
DeepPeak.egg-info/top_level.txt
DeepPeak/algorithms/__init__.py
DeepPeak/algorithms/base.py
DeepPeak/algorithms/cholesky_solver.py
DeepPeak/algorithms/closed_form_solver.py
DeepPeak/algorithms/non_maximum_suppression.py
DeepPeak/algorithms/peak_locator.py
DeepPeak/algorithms/zero_crossing.py
DeepPeak/analysis/__init__.py
DeepPeak/analysis/dead_time.py
DeepPeak/analysis/dilution_series.py
DeepPeak/analysis/trace_io.py
DeepPeak/analysis/trace_plots.py
DeepPeak/analysis/triggers.py
DeepPeak/analysis/wavenet_trace.py
DeepPeak/analysis/distributions/__init__.py
DeepPeak/analysis/distributions/amplitude.py
DeepPeak/analysis/distributions/event_arrival.py
DeepPeak/analysis/distributions/width.py
DeepPeak/analysis/metrics/__init__.py
DeepPeak/analysis/metrics/config.py
DeepPeak/analysis/metrics/detection.py
DeepPeak/analysis/metrics/distributions.py
DeepPeak/analysis/metrics/series_result.py
DeepPeak/analysis/metrics/trace_record.py
DeepPeak/analysis/metrics/utils.py
DeepPeak/kernels/__init__.py
DeepPeak/kernels/base.py
DeepPeak/kernels/custom.py
DeepPeak/kernels/dirac.py
DeepPeak/kernels/gaussian.py
DeepPeak/kernels/lorentzian.py
DeepPeak/kernels/square.py
DeepPeak/kernels/two_lobe_gaussian.py
DeepPeak/machine_learning/__init__.py
DeepPeak/machine_learning/classifier/__init__.py
DeepPeak/machine_learning/classifier/autoencoder.py
DeepPeak/machine_learning/classifier/base.py
DeepPeak/machine_learning/classifier/dense.py
DeepPeak/machine_learning/classifier/losses.py
DeepPeak/machine_learning/classifier/metrics.py
DeepPeak/machine_learning/classifier/utils.py
DeepPeak/machine_learning/classifier/wavenet.py
DeepPeak/machine_learning/weights/ROI_128.keras
DeepPeak/machine_learning/weights/__init__.py
DeepPeak/machine_learning/weights/temporary.keras
DeepPeak/utils/__init__.py
DeepPeak/utils/datasets.py
DeepPeak/utils/deconvolution.py
DeepPeak/utils/helper.py
DeepPeak/utils/history.py
DeepPeak/utils/io.py
DeepPeak/utils/iterables.py
DeepPeak/utils/signal_processing.py
development/confidence.py
development/dev_0.py
development/dev_1.py
development/train_roi_model.py
development/use_roi_model.py
docs/make.bat
docs/examples/README.rst
docs/examples/amplitude_retrieval.py
docs/examples/classifier_autoencoder.py
docs/examples/classifier_dense.py
docs/examples/classifier_wavenet.py
docs/examples/data_generation.py
docs/examples/data_generation_1.py
docs/examples/data_generation_custom_kernel.py
docs/examples/non_maximum_suppression.py
docs/images/logo.png
docs/source/code.rst
docs/source/conf.py
docs/source/index.rst
docs/source/references.rst
docs/source/sg_execution_times.rst
docs/source/theory.rst
docs/source/_static/default.css
docs/source/_static/logo.png
docs/source/_static/thumbnail.png
tests/__init__.py
tests/test_amplitude_analysis.py
tests/test_classifiers.py
tests/test_data_generation.py
tests/test_kernel.py
tests/test_package_api.py
tests/test_peak_count_analysis.py
tests/test_reference_pulse_trace.py
tests/test_utils.py
tests/test_width_analysis.py