LICENSE
README.md
pyproject.toml
src/fastq_sheet_audit/__init__.py
src/fastq_sheet_audit/adjudication.py
src/fastq_sheet_audit/cli.py
src/fastq_sheet_audit/column_mapping.py
src/fastq_sheet_audit/export_io.py
src/fastq_sheet_audit/export_plan.py
src/fastq_sheet_audit/gui.py
src/fastq_sheet_audit/gui_controller.py
src/fastq_sheet_audit/inventory.py
src/fastq_sheet_audit/naming.py
src/fastq_sheet_audit/output.py
src/fastq_sheet_audit/pairing.py
src/fastq_sheet_audit/pathmap.py
src/fastq_sheet_audit/portability.py
src/fastq_sheet_audit/presentation.py
src/fastq_sheet_audit/profile_validation.py
src/fastq_sheet_audit/profiles.py
src/fastq_sheet_audit/read_mode.py
src/fastq_sheet_audit/reconciliation.py
src/fastq_sheet_audit/report_io.py
src/fastq_sheet_audit/report_serialization.py
src/fastq_sheet_audit/reporting.py
src/fastq_sheet_audit/serialization.py
src/fastq_sheet_audit/sheet.py
src/fastq_sheet_audit/workflow.py
src/fastq_sheet_audit.egg-info/PKG-INFO
src/fastq_sheet_audit.egg-info/SOURCES.txt
src/fastq_sheet_audit.egg-info/dependency_links.txt
src/fastq_sheet_audit.egg-info/entry_points.txt
src/fastq_sheet_audit.egg-info/requires.txt
src/fastq_sheet_audit.egg-info/top_level.txt
src/fastq_sheet_audit/assets/app_icon.png
src/fastq_sheet_audit/profile_data/__init__.py
src/fastq_sheet_audit/profile_data/generic.json
src/fastq_sheet_audit/profile_data/nfcore-methylseq-4.2.0.json
src/fastq_sheet_audit/profile_data/nfcore-rnaseq-3.27.0.json
src/fastq_sheet_audit/profile_data/nfcore-smrnaseq-2.4.1.json
src/fastq_sheet_audit/profile_data/nfcore-viralrecon-3.0.0-illumina.json
src/fastq_sheet_audit/profile_data/nfcore-viralrecon-3.0.0-nanopore.json
tests/test_adjudication.py
tests/test_cli.py
tests/test_column_mapping.py
tests/test_export_io.py
tests/test_export_plan.py
tests/test_gui.py
tests/test_gui_controller.py
tests/test_inventory.py
tests/test_naming.py
tests/test_output.py
tests/test_pairing.py
tests/test_pathmap.py
tests/test_portability.py
tests/test_presentation.py
tests/test_profile_validation.py
tests/test_profiles.py
tests/test_read_mode.py
tests/test_reconciliation.py
tests/test_report_io.py
tests/test_report_serialization.py
tests/test_reporting.py
tests/test_serialization.py
tests/test_sheet.py
tests/test_text_atomic.py
tests/test_workflow.py