Penicillium
Copyright (c) 2026 Francesco Sartori. Licensed under the MIT License; the parts derived from IndPenSim are
also subject to IndPenSim's BSD 3-Clause License. Both licence texts are in LICENSE.

This product includes or derives from the following works.

1. IndPenSim (Industrial-scale Penicillin Simulation), MATLAB, version 2.01
   Copyright (c) 2016, Stephen Goldrick. All rights reserved.
   Distributed under the BSD 3-Clause License, reproduced in full in LICENSE (part 2).
   https://www.mathworks.com/matlabcentral/fileexchange/49041-industrial-scale-penicillin-simulationv2
   http://www.industrialpenicillinsimulation.com/
   The process model, controllers, recipe tables, fault profiles and the reference Raman spectrum of this
   package are derived from IndPenSim. Penicillium is not endorsed by Stephen Goldrick, by University
   College London or by any other contributor to IndPenSim. IndPenSim is described in:
     S. Goldrick, A. Stefan, D. Lovett, G. Montague, B. Lennox. The development of an industrial-scale
       fed-batch fermentation simulation. Journal of Biotechnology 193 (2015) 70-82.
       doi:10.1016/j.jbiotec.2014.10.029
     S. Goldrick, C. A. Duran-Villalobos, K. Jankauskas, D. Lovett, S. S. Farid, B. Lennox. Modern day
       monitoring and control challenges outlined on an industrial-scale benchmark fermentation process.
       Computers and Chemical Engineering 130 (2019) 106471. doi:10.1016/j.compchemeng.2019.05.037
   No MATLAB source file of IndPenSim is distributed with this package.

2. PenSimPy 1.2.5, Copyright (c) 2020 Quartic.ai Canada, Inc., MIT License.
   src/penicillium/model.py, simulator.py and raman.py contain portions derived from PenSimPy. Its MIT
   permission notice is reproduced in LICENSE (part 1).

3. Data. The PLS coefficients in src/penicillium/_paa_pls.py were fitted by this project on spectra it
   simulated (validation/train_paa_pls.py); IndPenSim's PAA_PLS_model.mat is not used or distributed.
   Comparisons with the published IndPenSim data set (Goldrick, 2019, Mendeley Data, doi:10.17632/pdnjz7zz5x.1,
   CC BY 4.0) download it at run time; it is not redistributed.
