numpy<3,>=1.23
biopython<2,>=1.81
hydra-core<2,>=1.3
threadpoolctl<4,>=3.2
tqdm<5,>=4

[dev]
pytest<10,>=7
pytest-cov<8,>=5
ruff<1,>=0.5
mypy<2,>=1.11
build<2,>=1.2
check-manifest<1,>=0.49
twine<7,>=5
pandas<4,>=1.5
matplotlib<4,>=3.7
lxml<7,>=4.9
scikit-learn<2,>=1.5

[eval]
pandas<4,>=1.5

[full]
pandas<4,>=1.5
matplotlib<4,>=3.7
lxml<7,>=4.9
scikit-learn<2,>=1.5

[ml]
pandas<4,>=1.5
scikit-learn<2,>=1.5

[scripts]
pandas<4,>=1.5
matplotlib<4,>=3.7
lxml<7,>=4.9
