opendde/__init__.py,sha256=SuZJVpaP_G6-mXmw08ZF9bv298BkFi3YFai1syuYb6Q,111
opendde/version.py,sha256=wKxjN6pUB0jqYS0f7SwdPe-tv7b5MNMPq7-8d2ko3OY,100
opendde/config/__init__.py,sha256=hc6frXly0Zt4aaYzi-Hnh6ASe4md72xhW_9mIaiRb8w,128
opendde/config/config.py,sha256=45Wchy0M9gXlYd-cnlzOGZDsq-ytP74K_pTWoJWBUDg,9907
opendde/config/data.py,sha256=mHgQoopWi9inAzleaAiiBa2mu2pvUsSWkJm7bIBfLKY,2082
opendde/config/dependency_url.py,sha256=kkPOnOk0vQ3-_Xd_OZpaukL5fY9uQaOG4iXjzXspB3I,4681
opendde/config/extend_types.py,sha256=71HIsJD5KJpW-oFBxyYdB6WIGBqxsTsjDxsIqXq9Ck8,1347
opendde/config/inference.py,sha256=lns2mSxkSBPKBialXFZFNu2Erlm7MPFBMDB45C6Opp4,6054
opendde/config/inference_defaults.py,sha256=O9OpavLItt9-wqG-cwnjNMtB2S0s6m4Ky5eYYM9WZ9A,1372
opendde/config/model_base.py,sha256=e0dzqXDT9jF7AfPMNJSJe1v_Vd9C377JYcrHl8mF_Xo,9286
opendde/config/model_manifest.json,sha256=ZgxBtlkdlqc29jhFf7LqTi7LspNrO7z5yYZc69RbRzM,1035
opendde/config/model_manifest.py,sha256=ydlEDFbIOMEijbQXXdWHl6-cfVNC5AUyBxFSYA8h6As,7746
opendde/config/model_registry.py,sha256=-8lr4WoPjmi0Ci2FhkKRWfwj-HfOAw_oomeai-j7WPM,800
opendde/config/schema.py,sha256=0kz0AHrNdWrdZc6E-IdFGhHoGCrT0Ew18a2l258lNAM,9717
opendde/data/__init__.py,sha256=_QcipNVpfOWFp7GVUXbixbUauveoaVM1s8G1IuN3lVo,78
opendde/data/constants.py,sha256=fw5CW-xP7m3F8LsoErknMVOtQ22o1qfmggIV-2wu1ys,43543
opendde/data/tokenizer.py,sha256=AXfIa3Hrf0IJmu2h1sKDwSNydfcqHIXRjQRphwLx1eo,16868
opendde/data/utils.py,sha256=ZVS6gfFYx4DW-uc0xm07i7PcFzhSAaJNk6KFYST2_sE,43277
opendde/data/core/__init__.py,sha256=_QcipNVpfOWFp7GVUXbixbUauveoaVM1s8G1IuN3lVo,78
opendde/data/core/ccd.py,sha256=dvjLbJeFe281yxuazJ0VuykDw4-9uUjRBfyIdAZ8mjE,17025
opendde/data/core/featurizer.py,sha256=S_guuNlEkixRWo2IaLbTN-bToa7jKROkpx1UKREmIP4,38995
opendde/data/core/filter.py,sha256=SWoqMzqIu8UpiiRmtMQ8QHc75H5hRvL62wqpW1NXg8Q,43481
opendde/data/core/geometry_featurizer.py,sha256=nyiHECOtOOGGPF4EUdV5w_GILtE0VAfDLL2Mu-2WGQU,30390
opendde/data/core/parser.py,sha256=ZWCt_-SY0AtwXN_HYuE6whOMUKcEBBxfAS4ZnlCLgx4,76363
opendde/data/core/substructure_perms.py,sha256=kpJaDkloSh0wR21lcgfsgp2_Zv_rTaLAbE5BtV3Iqb8,9303
opendde/data/inference/__init__.py,sha256=CNG5ZXlNvsKMzyD493WThQ4hPNuh22wu3H52P46h64Y,570
opendde/data/inference/infer_dataloader.py,sha256=rxsKLz8jRwZjPAMwEi9b47jeEZD4pnkcrbajbg5EEjU,9724
opendde/data/inference/json_maker.py,sha256=QvNuwQB2n4gut5CWsCWJ7f5GmfvchEbsq0nO_ZhEN6Y,12606
opendde/data/inference/json_parser.py,sha256=ntBtzvdwIYyI56U1D3spj_ooQIizagh_WUjEvaPF1Hw,22176
opendde/data/inference/json_to_feature.py,sha256=x-Xzmuy5X7XvYy_w4Fg65gmkFrCQy6YnSr5EiWJEDI8,16218
opendde/data/msa/__init__.py,sha256=_QcipNVpfOWFp7GVUXbixbUauveoaVM1s8G1IuN3lVo,78
opendde/data/msa/msa_featurizer.py,sha256=vHwFQMWE3XB1NPWz7S7zp_LG_-Y3-J9qB940vRxH1vs,15099
opendde/data/msa/msa_service_client.py,sha256=eMj0IIBfToLMzjgUjSqbScK9Vg_ZxXFf-VscG6x1DrU,15054
opendde/data/msa/msa_utils.py,sha256=NQB5_RyUX34_nkx294TEwBM0wnHw-2na3FXN4zpD770,16783
opendde/data/template/__init__.py,sha256=_QcipNVpfOWFp7GVUXbixbUauveoaVM1s8G1IuN3lVo,78
opendde/data/template/template_featurizer.py,sha256=PlAX5RFnoe7MkdeyElWzVrwoe_ayJiV-2FJuWPyvVCA,13036
opendde/data/template/template_parser.py,sha256=kSVNYowEV-APUqoAPJgWGXMDWHTYDJdr-wO0XW3YEOM,21332
opendde/data/template/template_utils.py,sha256=wwgsNTTntDW3wXxlNJMvEhaLgnPBEIUOvejlALekzjg,35352
opendde/data/tools/__init__.py,sha256=_QcipNVpfOWFp7GVUXbixbUauveoaVM1s8G1IuN3lVo,78
opendde/data/tools/common.py,sha256=paclHKTK_dEDICz27aQZ_evjuy_qnH-VTgFRYy9ccH0,6511
opendde/data/tools/kalign.py,sha256=z0YiNwPGG60I1-RmBqIFryUVHWw-zDHwhleyB1zA5Zg,4546
opendde/data/tools/logger.py,sha256=bbMBkbmAncZBif7gIqkiAFXWE2W9WQ22TnBPvOcUH-8,11720
opendde/data/tools/rewrite_biotite.py,sha256=MtWl4XwPmbe2_fqd7vPob6gMP2v9HjZXuO5CUjhAVxI,16597
opendde/data/tools/search.py,sha256=qXzrAXhs3i3gpUYqgZ4XwYqIOcyTw5I9rxSn3t6O5m4,15491
opendde/distributed/__init__.py,sha256=SRhD6dq3LESgKs64655X_ui--z-Q53wQSGgpShETQ9Q,115
opendde/distributed/foldcp/__init__.py,sha256=536p3nqrRCh0_4Xnemav6CHf6EJ_o7dbkpqkrK5aMtU,4382
opendde/distributed/foldcp/atom_window.py,sha256=g0g_15_QjJqZvJf3y8lMLHihj4ENw3puoYppJVousmI,15718
opendde/distributed/foldcp/comm.py,sha256=jMLK-QZkpkGiKnq2oxJv1YD3Fr65XyZgDuUfJKgmgu0,7118
opendde/distributed/foldcp/confidence.py,sha256=RbGIFjz66QUD9Dbt71bQzlpc9gK2RqkLXum7kPpkamM,21408
opendde/distributed/foldcp/config.py,sha256=ztW2f9OlHQRyD4MnsX44gtBfFzJiIx2ryEebPxkJKq0,4112
opendde/distributed/foldcp/distogram.py,sha256=eRNEuvyG3cVOKNbWGpEJBOaX0OAW5Esum-E6DcCY6iA,24138
opendde/distributed/foldcp/launch.py,sha256=DAk7ZylCZI1ZfwLgnmU4pbFznK2SqpuiM5kF9arYW38,12403
opendde/distributed/foldcp/layout.py,sha256=SpCFG8DJyO4m8DFv12kDytFJTVCYPFl1kRRT3VJICNc,2107
opendde/distributed/foldcp/mesh.py,sha256=zwE4C-goUedJPCfImUrCFHdSbAyqfACXcZoB0QHdCd0,3614
opendde/distributed/foldcp/metrics.py,sha256=YaJ3sTlCHnPoReb1p4W5Y6pFybEK1gllgZ6KUWbMwow,7562
opendde/distributed/foldcp/msa_pair_weighted.py,sha256=8VLh3K9_k3jEPpYMXlfehdz6gVv-4J7sv73FqmYeRzQ,9397
opendde/distributed/foldcp/online_softmax.py,sha256=ceHbJTuyz0PtaV4y-XcKHnY5-qHPXJNz3VYU8rJpFCI,2314
opendde/distributed/foldcp/opm.py,sha256=hxrsDg3pQMrxxhbZ1pDLcSleZ1wZTtLUWiugADfYjPw,3539
opendde/distributed/foldcp/pair_sharding.py,sha256=l39CiCRxLmnhAxhfo8ec6zACQ9UfQUc0qvtUZQ-Q4Y8,12612
opendde/distributed/foldcp/real_pairformer.py,sha256=nePcwSciUUcQDfXtLrYal4dRVKPw-O5901_tbpbs1XQ,180996
opendde/distributed/foldcp/structural_pair.py,sha256=if4f0rCubP54C4GHC3iovd0BToQ9Bp2wkyFxz1P27Mk,2865
opendde/distributed/foldcp/triangle_attention.py,sha256=IJ0BFXIESSO4n-yERxYRPjscfxDkVrWEufay1QrOlBs,4049
opendde/distributed/foldcp/triangular_mult.py,sha256=iXg-9CNze0HqlcXI-uW_h80xb7wMqyRPZ0Z7r29NgBI,9553
opendde/distributed/foldcp/triton_attention_bias.py,sha256=_rGmdhg45jV61fsfmxYcwWorHZH_INnnUvJuRnuEZME,2882
opendde/distributed/foldcp/trunk_init.py,sha256=F08SlWZgp8mp4FesGHY1eFr1jR4locfMgNPO0Ha2qqA,6363
opendde/metrics/__init__.py,sha256=_QcipNVpfOWFp7GVUXbixbUauveoaVM1s8G1IuN3lVo,78
opendde/metrics/clash.py,sha256=-rjU0PORd1pkpJKrbZVGui00Vbv2HP9v4Bl0zxTtjfI,11142
opendde/model/__init__.py,sha256=_QcipNVpfOWFp7GVUXbixbUauveoaVM1s8G1IuN3lVo,78
opendde/model/generator.py,sha256=UJ650bWebnPpgi9-ju6Ey4eIq-FaaXPV7nxVP8HtYUw,9751
opendde/model/msa_sampling.py,sha256=z9mBwqC4yEUrOzfkWQ6hRULdGcNjYGsMP36eUfg8yDo,2733
opendde/model/opendde.py,sha256=PkV4FUl1Oqpx045js0WHibOH_Tz1ZEemVYbz_XLXToU,68522
opendde/model/sample_confidence.py,sha256=_b3Z3bAtYKQZKDW3iYJX2OayLbA3IsAj1KzW_TwEFrI,31744
opendde/model/shape_complementarity.py,sha256=XseKnWi0Yv1I5I0ypNqnvQvzejLfXAKd91qvyWPXB0I,29683
opendde/model/utils.py,sha256=A0ZmbDui6JU3JyspXkjEZ6lSzaLAJO2LEJclkMZkGAs,20427
opendde/model/layer_norm/__init__.py,sha256=My1ZAZlThebFHgSYmOkgDLbsSDZXH4VKca26NMAjXtM,756
opendde/model/layer_norm/layer_norm.py,sha256=hDvEBgk0FjyKjQ0U2mMJILYu07OMUyJkMskOWp9EL3g,9677
opendde/model/layer_norm/torch_ext_compile.py,sha256=LmVqB6Cx1tnZ9iqf-UISYG0qF1w1NpnnoRIH77iFt70,1037
opendde/model/layer_norm/kernel/compat.h,sha256=JNpl1eCljGSDq9YOem1vyn5KvJMD8IyQKXXHe96svAg,816
opendde/model/layer_norm/kernel/layer_norm_cuda.cpp,sha256=sD2ZUEL-3hJrHjao6cnnNDOlmPUjrZFHideurrishC0,8097
opendde/model/layer_norm/kernel/layer_norm_cuda_kernel.cu,sha256=rXUlH2-rv1m7yDY3qWACBMYqIMasVjp0JpS7_IwMGAo,44614
opendde/model/layer_norm/kernel/type_shim.h,sha256=gkoN_bW_sTFhh7Oj98EMm0FJa5clnd-EyIIVLM7Gano,13237
opendde/model/modules/__init__.py,sha256=_QcipNVpfOWFp7GVUXbixbUauveoaVM1s8G1IuN3lVo,78
opendde/model/modules/confidence.py,sha256=nSaVM68oNFcaNNrp3RldK_fPQKiw-80GbOFvYjUuEbg,26767
opendde/model/modules/diffusion.py,sha256=SvcniNJwKsnQ16D3XI3NC_TUobpZVPP34z0sug7t3vg,63053
opendde/model/modules/embedders.py,sha256=I1ycfP2vo0tUtXpUEYK0-3ULIt3KQbz0rCEHNqdnFLc,12056
opendde/model/modules/head.py,sha256=7Gbe49acLhPup5-_0AcQO2uB2cbxynWbx_TIBxuhyJs,3044
opendde/model/modules/pairformer.py,sha256=tuOupAz2QolGTcb5_Z5sG1_dx2Jji-EEF9jn7Wfd6qk,86120
opendde/model/modules/primitives.py,sha256=IgaP9slv1EJTjEm3QdT5KKuw6NdIdefX2MvgE4w2GRQ,31167
opendde/model/modules/structural_tokens.py,sha256=m2vx3GTjvdz3fZDfLsCXgxdXSluKW9DvjFl12OsE8xY,45084
opendde/model/modules/transformer.py,sha256=kpUjroRA5Bz7B38v6oUyH2kzsO6QBmTUu186q8XP_ds,88617
opendde/model/triangular/__init__.py,sha256=_QcipNVpfOWFp7GVUXbixbUauveoaVM1s8G1IuN3lVo,78
opendde/model/triangular/layers.py,sha256=6RbVh9Q7RS2B-WKpL5LJ4sYYMI9sv8jIY1t9b8kS5yA,18681
opendde/model/triangular/triangular.py,sha256=Lpk1m_WMMNNZIlX8thQe7L0oVU3kMks9cJYRzEcqdZU,26676
opendde/tfg/__init__.py,sha256=KDLErbM9Gm9fF7gcRshhziocEA33XrXFXzePtEfvuGw,308
opendde/tfg/config.py,sha256=hbF08kr8IH861yUu0AUvSztunct2jAjOTJwnKS9dB1w,16119
opendde/tfg/engine.py,sha256=L2R_wTTHwOBYmADYylSXRzwOezI0yei_5PK1-MP-NGE,19315
opendde/tfg/potentials.py,sha256=8VW91UGCubKeIcwATXJLjY2F1kqAYMOGUsXOZ77-Dl8,51879
opendde/utils/__init__.py,sha256=_QcipNVpfOWFp7GVUXbixbUauveoaVM1s8G1IuN3lVo,78
opendde/utils/distributed.py,sha256=bEr9jHRocAvy7qq_XQoLt-Ym7XD1LQqB0EtcdBhEDL8,2194
opendde/utils/download.py,sha256=qChPP4-fAkBR1boIXNX0iV9VuSu3KYPkvCYT-pynLfk,10488
opendde/utils/environment.py,sha256=1_sWV55JDPkl4a9H8r0bzrqalGOLHjN3FaBghFYWNSA,15438
opendde/utils/file_io.py,sha256=8dMLr2bn_l25ZDuO9l7LHrE_EUgH-dwRME-CW3d3Jd0,6792
opendde/utils/geometry.py,sha256=Uo3yEEyDhN75t0EXJvLKx4sCjjxU2EQB2H85PS483O8,1862
opendde/utils/logger.py,sha256=x9oKZ01nX7NhRoWDyvJcnHpuSx4TgQhLCVHwMpLWfmw,2426
opendde/utils/logging_config.py,sha256=JI8010F9kA-Ea5i4r0667ahkgOrpcAfd4-5t7zl9zLE,606
opendde/utils/scatter_utils.py,sha256=XV0gpEDrBp2BYHaFuGXFaRWw98uzQkqapyNsqj5Zl0o,6447
opendde/utils/seed.py,sha256=J6_4rPa5GX72-bSB97AhduwNFRmZ6TDWKONd-8O2N38,976
opendde/utils/torch_utils.py,sha256=vbBfDC6j_tCPMIP6zC4lpzh8FTGmNoOhuCqKbPFksv0,4251
opendde-1.0.3.dist-info/licenses/LICENSE,sha256=kpUQNWDffkltdCDYl-zjsuY2WrJXHTBg1in6EKJlfL0,11358
runner/__init__.py,sha256=_QcipNVpfOWFp7GVUXbixbUauveoaVM1s8G1IuN3lVo,78
runner/batch_inference.py,sha256=azbGpE9omqCM1ohq4zQPrVBSPFPOnf2lLoGbkAUlpnM,48396
runner/cli.py,sha256=YlrX-w0UMruigQq8YsPpXrz22DurGhqIfdoSk8R5cEc,3912
runner/dumper.py,sha256=yDRhZ8C8kGESJXEChDENvLPotSgexZICmA1AvapS4e0,9626
runner/inference.py,sha256=g2g1LkAsUtsQzjNycWO1Phlj2WBuCfhnqoQ53tdleWA,22467
runner/msa_search.py,sha256=TYaQsV4VTVhG_UvJxNh9no28_C7MwRFalRuq8-j9OhQ,9313
runner/rna_msa_search.py,sha256=hZeMEHEofhvGB4b-KO4Hefr9D_615rkZmtsAI132vsk,15224
runner/template_search.py,sha256=GHfFuizw5sLdRxo3nVAe-tWa64ze3ihkeVTdmRv5fTY,8978
opendde-1.0.3.dist-info/METADATA,sha256=rXs4ofDHCkFQ7grEwfmUeMiQ4ktDIosVgj89LI-3bzs,13891
opendde-1.0.3.dist-info/WHEEL,sha256=K260EYznzXsJYBQGqmI8VTxEdiZYNvDZwW9cBh9-_MA,91
opendde-1.0.3.dist-info/entry_points.txt,sha256=6l_LiJ6sP8_7GPxh8J9ASHWBQb04r8fI1ffTcjMuV7M,51
opendde-1.0.3.dist-info/top_level.txt,sha256=u7A53O8AHdebaLIp67ApjZgBPeIMMckWNe3ngDhnOxI,15
opendde-1.0.3.dist-info/RECORD,,
