{% extends "base.html" %} {% block content %} rna-tools.online

Standarize PDB files for Molecular Dynamics

Clean up a structure, get current order of atoms.

This is also the submission format required for OpenMM.

{% csrf_token %}
{{ log | safe }}

The raw output files for each step of the pipeline can be found here

Documentation

This is https://rna-tools.readthedocs.io/en/latest/main.html#get-rnapuzzle-ready with option to remove starting OP3 atoms. {% endblock %}