LICENSE
README.md
pyproject.toml
encodefetch/__init__.py
encodefetch/cli.py
encodefetch/core.py
encodefetch/encode_client.py
encodefetch/postprocess.py
encodefetch.egg-info/PKG-INFO
encodefetch.egg-info/SOURCES.txt
encodefetch.egg-info/dependency_links.txt
encodefetch.egg-info/entry_points.txt
encodefetch.egg-info/requires.txt
encodefetch.egg-info/top_level.txt
encodefetch/assays/__init__.py
encodefetch/assays/atacseq.py
encodefetch/assays/base.py
encodefetch/assays/chipseq.py
encodefetch/assays/rnaseq.py
encodefetch/exporters/__init__.py
encodefetch/exporters/base.py
encodefetch/exporters/nfcore_atacseq.py
encodefetch/exporters/nfcore_chipseq.py
encodefetch/exporters/nfcore_rnaseq.py
encodefetch/exporters/snakemake_atacseq.py
encodefetch/exporters/snakemake_chipseq.py
encodefetch/exporters/snakemake_rnaseq.py
scripts/plot_application_note_figure.py
tests/test_accessions.py
tests/test_cli_options.py
tests/test_core_metadata.py
tests/test_encode_client.py
tests/test_exporters.py
tests/test_postprocess.py