.gitignore
.pre-commit-config.yaml
.readthedocs.yaml
CHANGELOG.md
LICENSE
MANIFEST.in
README.md
RELEASE.md
pyproject.toml
.github/workflows/linting.yml
.github/workflows/pipeline_testing.yml
.github/workflows/pipeline_testing_matrix.yml
.github/workflows/publish.yml
.github/workflows/testing.yml
brainsets/__init__.py
brainsets/config.py
brainsets/core.py
brainsets/descriptions.py
brainsets/pipeline.py
brainsets/runner.py
brainsets.egg-info/PKG-INFO
brainsets.egg-info/SOURCES.txt
brainsets.egg-info/dependency_links.txt
brainsets.egg-info/entry_points.txt
brainsets.egg-info/requires.txt
brainsets.egg-info/top_level.txt
brainsets/_cli/__init__.py
brainsets/_cli/cli.py
brainsets/_cli/cli_completion.py
brainsets/_cli/cli_config.py
brainsets/_cli/cli_list.py
brainsets/_cli/cli_prepare.py
brainsets/_cli/utils.py
brainsets/datasets/AllenVisualCodingOphys2016.py
brainsets/datasets/ChurchlandShenoyNeural2012.py
brainsets/datasets/FlintSlutzkyAccurate2012.py
brainsets/datasets/KempSleepEDF2013.py
brainsets/datasets/Neuroprobe2025.py
brainsets/datasets/OdohertySabesNonhuman2017.py
brainsets/datasets/PeiPandarinathNLB2021.py
brainsets/datasets/PerichMillerPopulation2018.py
brainsets/datasets/VollanMoserAlternating2025.py
brainsets/datasets/__init__.py
brainsets/datasets/_utils.py
brainsets/processing/__init__.py
brainsets/processing/signal.py
brainsets/taxonomy/__init__.py
brainsets/taxonomy/allen.py
brainsets/taxonomy/drifting_gratings.py
brainsets/taxonomy/homosapiens.py
brainsets/taxonomy/macaque.py
brainsets/taxonomy/mice.py
brainsets/taxonomy/recording_tech.py
brainsets/taxonomy/speech.py
brainsets/taxonomy/subject.py
brainsets/taxonomy/task.py
brainsets/taxonomy/writing.py
brainsets/utils/__init__.py
brainsets/utils/bids_utils.py
brainsets/utils/dandi_utils.py
brainsets/utils/misc_utils.py
brainsets/utils/mne_utils.py
brainsets/utils/s3_utils.py
brainsets/utils/split.py
brainsets_pipelines/allen_visual_coding_ophys_2016/pipeline.py
brainsets_pipelines/allen_visual_coding_ophys_2016/session_ids.txt
brainsets_pipelines/allen_visual_coding_ophys_2016/split.py
brainsets_pipelines/churchland_shenoy_neural_2012/pipeline.py
brainsets_pipelines/flint_slutzky_accurate_2012/pipeline.py
brainsets_pipelines/kemp_sleep_edf_2013/pipeline.py
brainsets_pipelines/neuroprobe_2025/pipeline.py
brainsets_pipelines/odoherty_sabes_nonhuman_2017/pipeline.py
brainsets_pipelines/pei_pandarinath_nlb_2021/README.md
brainsets_pipelines/pei_pandarinath_nlb_2021/pipeline.py
brainsets_pipelines/perich_miller_population_2018/pipeline.py
brainsets_pipelines/vollan_moser_alternating_2025/pipeline.py
docs/Makefile
docs/README.md
docs/make.bat
docs/requirements.txt
docs/source/conf.py
docs/source/index.rst
docs/source/_ext/custom_autosummary.py
docs/source/_static/brainsets_logo.png
docs/source/_static/coalesce.png
docs/source/_static/difference.png
docs/source/_static/dilate.png
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docs/source/_static/style.css
docs/source/_static/union.png
docs/source/_templates/autosummary/class.rst
docs/source/_templates/autosummary/class_dataset.rst
docs/source/_templates/autosummary/data.rst
docs/source/_templates/autosummary/function.rst
docs/source/cli/commands.rst
docs/source/concepts/create_pipeline.rst
docs/source/concepts/installation.rst
docs/source/concepts/neuroprobe.rst
docs/source/concepts/prepare_data.rst
docs/source/concepts/using_existing_data.rst
docs/source/datasets/index.rst
docs/source/package/brainsetpipeline.rst
docs/source/package/core.rst
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docs/source/package/processing.rst
docs/source/package/taxonomy.rst
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tests/test_bids_utils.py
tests/test_cli.py
tests/test_descriptions.py
tests/test_enum_unique.py
tests/test_misc_utils.py
tests/test_mne_utils.py
tests/test_neuroprobe2025_dataset.py
tests/test_neuroprobe2025_pipeline.py
tests/test_read_inline_metadata.py
tests/test_s3_utils.py
tests/test_signal.py
tests/test_split_utils.py
tests/test_version.py
tests/test_vollan_pipeline.py
tests/util.py