Adapter

Adapters provide an interface to raw data repositories. They provide the download logic to place structure files and meta data to a local directory (raw_path). After download, they construct the initial Data-iterator, as well as Split and Assets objects. Usually, Adapters make use of a Processor to convert raw structure files to Data objects.

class bioverse.adapter.Adapter

Bases: ABC

abstract download(*args, **kwargs) → Tuple[Iterator[Batch], Split, Assets]

Implement this method to download raw data from a repository and return the Batch-iterator, Split and Assets objects.