LICENSE.txt
README.md
pyproject.toml
src/pycodon_analyzer/__init__.py
src/pycodon_analyzer/__main__.py
src/pycodon_analyzer/analysis.py
src/pycodon_analyzer/cli.py
src/pycodon_analyzer/extraction.py
src/pycodon_analyzer/io.py
src/pycodon_analyzer/plotting.py
src/pycodon_analyzer/reporting.py
src/pycodon_analyzer/utils.py
src/pycodon_analyzer.egg-info/PKG-INFO
src/pycodon_analyzer.egg-info/SOURCES.txt
src/pycodon_analyzer.egg-info/dependency_links.txt
src/pycodon_analyzer.egg-info/entry_points.txt
src/pycodon_analyzer.egg-info/requires.txt
src/pycodon_analyzer.egg-info/top_level.txt
src/pycodon_analyzer/data/human_codon_usage.csv
src/pycodon_analyzer/templates/base_template.html
src/pycodon_analyzer/templates/combined_ca_page_template.html
src/pycodon_analyzer/templates/correlation_heatmaps_page_template.html
src/pycodon_analyzer/templates/gene_aggregates_page_template.html
src/pycodon_analyzer/templates/index_page_template.html
src/pycodon_analyzer/templates/metadata_plots_page_template.html
src/pycodon_analyzer/templates/per_gene_rscu_page_template.html
src/pycodon_analyzer/templates/sequence_metrics_page_template.html
src/pycodon_analyzer/templates/statistical_comparisons_page_template.html
tests/test_analysis.py
tests/test_cli.py
tests/test_extraction.py
tests/test_io.py
tests/test_plotting.py
tests/test_reporting.py
tests/test_utils.py