LICENSE
README.md
pyproject.toml
requirements.txt
src/af_analysis/__init__.py
src/af_analysis/analysis.py
src/af_analysis/clustering.py
src/af_analysis/data.py
src/af_analysis/docking.py
src/af_analysis/plot.py
src/af_analysis/sequence.py
src/af_analysis.egg-info/PKG-INFO
src/af_analysis.egg-info/SOURCES.txt
src/af_analysis.egg-info/dependency_links.txt
src/af_analysis.egg-info/entry_points.txt
src/af_analysis.egg-info/requires.txt
src/af_analysis.egg-info/top_level.txt
src/af_analysis/format/__init__.py
src/af_analysis/format/af3_local.py
src/af_analysis/format/af3_webserver.py
src/af_analysis/format/afpulldown.py
src/af_analysis/format/boltz1.py
src/af_analysis/format/chai1.py
src/af_analysis/format/colabfold_1_5.py
src/af_analysis/format/default.py
src/af_analysis/format/massivefold.py
src/af_analysis_gui/__init__.py
src/af_analysis_gui/__main__.py
src/af_analysis_gui/flask_app.py
src/af_analysis_gui/static/css/app.css
src/af_analysis_gui/static/img/favicon.ico
src/af_analysis_gui/static/img/logo.jpeg
src/af_analysis_gui/static/js/api.js
src/af_analysis_gui/static/js/main.js
src/af_analysis_gui/static/js/molstar.js
src/af_analysis_gui/static/js/plot.js
src/af_analysis_gui/static/js/resize.js
src/af_analysis_gui/static/js/table.js
src/af_analysis_gui/templates/flask_index.html
tests/test_analysis.py
tests/test_clustering.py
tests/test_data.py
tests/test_docking.py
tests/test_format.py
tests/test_sequence.py