LICENSE
MANIFEST.in
README.md
pyproject.toml
requirements.txt
setup.py
BEASTsim/__init__.py
BEASTsim/beast.py
BEASTsim/beast_data.py
BEASTsim.egg-info/PKG-INFO
BEASTsim.egg-info/SOURCES.txt
BEASTsim.egg-info/dependency_links.txt
BEASTsim.egg-info/requires.txt
BEASTsim.egg-info/top_level.txt
BEASTsim/modules/__init__.py
BEASTsim/modules/analysis/__init__.py
BEASTsim/modules/analysis/analysis.py
BEASTsim/modules/analysis/gene_expression_module/__init__.py
BEASTsim/modules/analysis/gene_expression_module/gene_expression_analysis.py
BEASTsim/modules/analysis/spatial_module/__init__.py
BEASTsim/modules/analysis/spatial_module/simulation_analysis.py
BEASTsim/modules/analysis/spatial_module/spatial_analysis.py
BEASTsim/modules/analysis/spatial_module/SVG/SVG_SpatialDE.py
BEASTsim/modules/analysis/spatial_module/SVG/__init__.py
BEASTsim/modules/analysis/spatial_module/cell_mapping/__init__.py
BEASTsim/modules/analysis/spatial_module/cell_mapping/cell2location.py
BEASTsim/modules/analysis/spatial_module/cell_mapping/cell_mapping_analysis.py
BEASTsim/modules/analysis/spatial_module/simulation/__init__.py
BEASTsim/modules/analysis/spatial_module/simulation/plotting_simulation.py
BEASTsim/modules/analysis/spatial_module/simulation/plotting/SVG_plotting.py
BEASTsim/modules/analysis/spatial_module/simulation/plotting/__init__.py
BEASTsim/modules/analysis/spatial_module/simulation/plotting/cell_type_plotting.py
BEASTsim/modules/analysis/spatial_module/simulation/plotting/neighborhood_plotting.py
BEASTsim/modules/analysis/spatial_module/simulation/plotting/similarity_plotting.py
BEASTsim/modules/benchmarking/__init__.py
BEASTsim/modules/benchmarking/benchmarking.py
BEASTsim/modules/benchmarking/simulation/__init__.py
BEASTsim/modules/benchmarking/simulation/simulation_benchmark.py
BEASTsim/modules/benchmarking/simulation/biological_signals/__init__.py
BEASTsim/modules/benchmarking/simulation/biological_signals/biological_signals_benchmark.py
BEASTsim/modules/benchmarking/simulation/biological_signals/count_based_biological_signals.py
BEASTsim/modules/benchmarking/simulation/biological_signals/spatial_biological_signals.py
BEASTsim/modules/benchmarking/simulation/data_properties/__init__.py
BEASTsim/modules/benchmarking/simulation/data_properties/data_property_benchmark.py
BEASTsim/modules/benchmarking/simulation/data_properties/generic_data_properties.py
BEASTsim/modules/benchmarking/simulation/data_properties/kde_data_properties.py
BEASTsim/modules/benchmarking/simulation/data_properties/KDE/KDE_multivariate.py
BEASTsim/modules/benchmarking/simulation/data_properties/KDE/KDE_univariate.py
BEASTsim/modules/benchmarking/simulation/data_properties/KDE/__init__.py
BEASTsim/modules/benchmarking/simulation/similarity/__init__.py
BEASTsim/modules/benchmarking/simulation/similarity/similarity_benchmark.py
BEASTsim/utils/__init__.py
BEASTsim/utils/utils.py
BEASTsim/utils/utils_cache.py
BEASTsim/utils/utils_plot.py
BEASTsim/utils/utils_runtime_analysis.py