omegaconf
numpy
pandas
h5py
tqdm
rich
wandb
pillow
matplotlib
opencv-python

[all]
openslide-python
openslide-bin
wholeslidedata==0.0.15
numpy<2
cucim-cu12>=26.02.00
cupy-cuda12x
nvidia-nvimgcodec-cu12>=0.7.0
pyvips

[asap]
wholeslidedata==0.0.15
numpy<2

[cucim]
cucim-cu12>=26.02.00
cupy-cuda12x
nvidia-nvimgcodec-cu12>=0.7.0

[openslide]
openslide-python
openslide-bin

[sam2]
torch>=2.0.0
hydra-core>=1.3.2
huggingface-hub>=0.23.0

[testing]
pytest>=6.0
pytest-cov>=2.0
mypy>=0.910
flake8>=3.9
flake8-pyproject>=1.2.3
tox>=3.24

[vips]
pyvips
