Metadata-Version: 2.1
Name: scipion-em-recovar
Version: 3.1.0
Summary: Plugin to use RECOVAR within the Scipion framework
Author-email: Scipion Team <scipion@cnb.csic.es>
License: GNU General Public License v3 (GPLv3)
Project-URL: Homepage, https://github.com/scipion-em/scipion-em-recovar
Project-URL: Issues, https://github.com/scipion-em/scipion-em-recovar/issues
Keywords: scipion,cryoem,flexibility,heterogeneity,imageprocessing,scipion-3.0
Classifier: Development Status :: 4 - Beta
Classifier: Programming Language :: Python :: 3
Requires-Python: >=3.8
Description-Content-Type: text/x-rst
License-File: LICENSE

===============
RECOVAR Plugin
===============

This plugin provides wrappers for several programs of `RECOVAR <https://github.com/ma-gilles/recovar>`_ software suite.

.. image:: https://img.shields.io/pypi/v/scipion-em-recovar.svg
        :target: https://pypi.python.org/pypi/scipion-em-recovar
        :alt: PyPI release

.. image:: https://img.shields.io/pypi/l/scipion-em-recovar.svg
        :target: https://pypi.python.org/pypi/scipion-em-recovar
        :alt: License

.. image:: https://img.shields.io/pypi/pyversions/scipion-em-recovar.svg
        :target: https://pypi.python.org/pypi/scipion-em-recovar
        :alt: Supported Python versions

.. image:: https://img.shields.io/sonar/quality_gate/scipion-em_scipion-em-recovar?server=https%3A%2F%2Fsonarcloud.io
        :target: https://sonarcloud.io/dashboard?id=scipion-em_scipion-em-recovar
        :alt: SonarCloud quality gate

.. image:: https://img.shields.io/pypi/dm/scipion-em-recovar
        :target: https://pypi.python.org/pypi/scipion-em-recovar
        :alt: Downloads

Installation
------------

You will need to use 3.0+ version of Scipion to be able to run these protocols. To install the plugin, you have two options:

a) Stable version

   .. code-block::

      scipion installp -p scipion-em-recovar

b) Developer's version

   * download repository

   .. code-block::

      git clone -b devel https://github.com/scipion-em/scipion-em-recovar.git

   * install

   .. code-block::

      scipion installp -p /path/to/scipion-em-recovar --devel

Supported versions
------------------

0.4.5

Protocols
---------

* Analyze
* Pipeline


References
----------

1. Marc A. Gilles, Amit Singer, Proceedings of the National Academy of Sciences, 2025 
